Gene Nham_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3855 
Symbol 
ID4030094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4234697 
End bp4235233 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID637972244 
Producthypothetical protein 
Protein accessionYP_579018 
Protein GI92119289 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.588539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGC CTTTCTACAC GATCGGTCAT TCCACCCGGA CAATAGAGGC GTTCGTTGAT 
TTGCTGCGGG CAGGCCGGGT GACCATTGTC GCTGACATTC GCTCAGTGCC GAGGTCGCGG
ACAAATCCGC AGTTCAATAC CGACACGTTA CCCAGGGCTT TGGCTGAGTT CCAGATCGGC
TACGAACATA TCGCTGAATT GGGCGGCTTG CGCGGTAAAG CGAAGGCGAT CGAGCCAGAC
ATCAATGGTT TCTGGGAGAA CCGCAGTTTT CACAATTATG CCGACTATGC TCTTACCAGC
GCATTCAGTA ACGGCCTTGA TCGTCTCATC GCGCTGGGGC GCGAACAGCG ATGCGCGATG
ATGTGCTCCG AGACGGTGTG GTGGCGGTGC CACCGTCGGC TCGTTACGGA CAACCTCATA
GCACGCGGCG AGAACGTCTT TCATCTGATG GGCAAAGATA AAGTGGAGAC GGCAAAAATG
ACCGCAGGCG CGCGTGTTCA GAAAAACGGA ACGGTGACCT ACCCGTTGGA ATCATGA
 
Protein sequence
MALPFYTIGH STRTIEAFVD LLRAGRVTIV ADIRSVPRSR TNPQFNTDTL PRALAEFQIG 
YEHIAELGGL RGKAKAIEPD INGFWENRSF HNYADYALTS AFSNGLDRLI ALGREQRCAM
MCSETVWWRC HRRLVTDNLI ARGENVFHLM GKDKVETAKM TAGARVQKNG TVTYPLES