Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3833 |
Symbol | |
ID | 4030610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4209642 |
End bp | 4210931 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637972222 |
Product | hypothetical protein |
Protein accession | YP_578996 |
Protein GI | 92119267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00500542 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCG CACGAGCAAT ATTCAGAATT GCCTACTTTT TGGATCTCCT TGAAGTTTTC GAGGCACGGG CCAATGACGT GGATCTGCGG GAGCATGTGT TCTCTCGTAT CAAGTGGTTT ATCGAGAAGC GGGCTGAATA TCTAAATCCT CGTTTGAACG GAAAGCCGCT TCGCAAGCTG AGTGAGGTTA GATATTCGGA ATTGGAAGAT GCCCTGTCCC GCCGACCGGT GTCTTCGAAT TCCAATGACC TATACTTTTC CGAAGCTGAG ATGGACCAGC TGCTCCTGGC CTATGAACAA TATTTGGAAG CGTGGCTCCT ACTGAGCGGT CTAGGACAGG GTACAAGTCT GACCGGTACG TTCAATAAAG GTCAGACGGT CGGCGCTGCC AAAAGGGCTT TGTCGGCGAA CAATTTAAAA AGTTCGGACC TGGCAGACGC GACTGCCCTC CGCACTTTTC TCGACCCGCT CGTTTTCTCG GAACGACAGC GTGGAAACGG CGTTCGAGCA TTCGGCAAGG GCCGACAGAT TTATATGGCC TTCACAAAAT GGCCAGGATC TTTCTCGTTG AGCGAAAAAG CGCTCGTCAA CCTCAGACTG AACATATTGA TCAGGATCGG CTACGCAGCT TACCAGCACG AGCTTGGCGA TCAGCTCGTT TGGTTTCGTC GGGAGGTCGA AGCGCTTCAA AAAGATCATA CTGACTTTGC CGATCTATGC GACCTCGTTC TGTTGCAACA CGAGGGATAC CAATCGGCGA CTTCTGACGC CCCTTTCGAA GCGCTGATGC TGGGCTACAA CATCAAGAAG TCGAACCACC CGTTTTTTGG TTACGGCATG TGCGAGGGAG GCCTGCTGCA CAACGCGGGC ACCTGCGCAA CCGGGATCGG ATACGATTTT GATGCCAAAG TCGACAAGGC TGGCGGACTA TCAGTTCGAG AGATGCTGGT GCGAGCACGC GAATTAGATA TCGACGATGG TGACTTTGAA GGGGCTGCTT TTTCGGCCGG TGGTCTGGCG CGAGCCCTCG ACAGGGCAAA GCACCATGAA AGGGCCATGG ACGTTGTCAA TGAGGGCTTG GCGGGATTCG CTCAAAGTGG TGTAACCGCG CCATATGCGT TCGTCTCATT GCTGAAAACA CGAGCCTCTA TCTATTTCTC GCTTTCAAAG AAGAGCAACG ACCTCAATCT AGCCAGGCTA GCCGGCGCCG ATTCTGCGGC AGCGCTTGAC CTTGCCAAAA AACATGGATT GGTCCACTTG ACCAAAGATG TTGTCCCGCC AGAAAAATAG
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Protein sequence | MDRARAIFRI AYFLDLLEVF EARANDVDLR EHVFSRIKWF IEKRAEYLNP RLNGKPLRKL SEVRYSELED ALSRRPVSSN SNDLYFSEAE MDQLLLAYEQ YLEAWLLLSG LGQGTSLTGT FNKGQTVGAA KRALSANNLK SSDLADATAL RTFLDPLVFS ERQRGNGVRA FGKGRQIYMA FTKWPGSFSL SEKALVNLRL NILIRIGYAA YQHELGDQLV WFRREVEALQ KDHTDFADLC DLVLLQHEGY QSATSDAPFE ALMLGYNIKK SNHPFFGYGM CEGGLLHNAG TCATGIGYDF DAKVDKAGGL SVREMLVRAR ELDIDDGDFE GAAFSAGGLA RALDRAKHHE RAMDVVNEGL AGFAQSGVTA PYAFVSLLKT RASIYFSLSK KSNDLNLARL AGADSAAALD LAKKHGLVHL TKDVVPPEK
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