Gene Nham_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3833 
Symbol 
ID4030610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4209642 
End bp4210931 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content53% 
IMG OID637972222 
Producthypothetical protein 
Protein accessionYP_578996 
Protein GI92119267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00500542 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCG CACGAGCAAT ATTCAGAATT GCCTACTTTT TGGATCTCCT TGAAGTTTTC 
GAGGCACGGG CCAATGACGT GGATCTGCGG GAGCATGTGT TCTCTCGTAT CAAGTGGTTT
ATCGAGAAGC GGGCTGAATA TCTAAATCCT CGTTTGAACG GAAAGCCGCT TCGCAAGCTG
AGTGAGGTTA GATATTCGGA ATTGGAAGAT GCCCTGTCCC GCCGACCGGT GTCTTCGAAT
TCCAATGACC TATACTTTTC CGAAGCTGAG ATGGACCAGC TGCTCCTGGC CTATGAACAA
TATTTGGAAG CGTGGCTCCT ACTGAGCGGT CTAGGACAGG GTACAAGTCT GACCGGTACG
TTCAATAAAG GTCAGACGGT CGGCGCTGCC AAAAGGGCTT TGTCGGCGAA CAATTTAAAA
AGTTCGGACC TGGCAGACGC GACTGCCCTC CGCACTTTTC TCGACCCGCT CGTTTTCTCG
GAACGACAGC GTGGAAACGG CGTTCGAGCA TTCGGCAAGG GCCGACAGAT TTATATGGCC
TTCACAAAAT GGCCAGGATC TTTCTCGTTG AGCGAAAAAG CGCTCGTCAA CCTCAGACTG
AACATATTGA TCAGGATCGG CTACGCAGCT TACCAGCACG AGCTTGGCGA TCAGCTCGTT
TGGTTTCGTC GGGAGGTCGA AGCGCTTCAA AAAGATCATA CTGACTTTGC CGATCTATGC
GACCTCGTTC TGTTGCAACA CGAGGGATAC CAATCGGCGA CTTCTGACGC CCCTTTCGAA
GCGCTGATGC TGGGCTACAA CATCAAGAAG TCGAACCACC CGTTTTTTGG TTACGGCATG
TGCGAGGGAG GCCTGCTGCA CAACGCGGGC ACCTGCGCAA CCGGGATCGG ATACGATTTT
GATGCCAAAG TCGACAAGGC TGGCGGACTA TCAGTTCGAG AGATGCTGGT GCGAGCACGC
GAATTAGATA TCGACGATGG TGACTTTGAA GGGGCTGCTT TTTCGGCCGG TGGTCTGGCG
CGAGCCCTCG ACAGGGCAAA GCACCATGAA AGGGCCATGG ACGTTGTCAA TGAGGGCTTG
GCGGGATTCG CTCAAAGTGG TGTAACCGCG CCATATGCGT TCGTCTCATT GCTGAAAACA
CGAGCCTCTA TCTATTTCTC GCTTTCAAAG AAGAGCAACG ACCTCAATCT AGCCAGGCTA
GCCGGCGCCG ATTCTGCGGC AGCGCTTGAC CTTGCCAAAA AACATGGATT GGTCCACTTG
ACCAAAGATG TTGTCCCGCC AGAAAAATAG
 
Protein sequence
MDRARAIFRI AYFLDLLEVF EARANDVDLR EHVFSRIKWF IEKRAEYLNP RLNGKPLRKL 
SEVRYSELED ALSRRPVSSN SNDLYFSEAE MDQLLLAYEQ YLEAWLLLSG LGQGTSLTGT
FNKGQTVGAA KRALSANNLK SSDLADATAL RTFLDPLVFS ERQRGNGVRA FGKGRQIYMA
FTKWPGSFSL SEKALVNLRL NILIRIGYAA YQHELGDQLV WFRREVEALQ KDHTDFADLC
DLVLLQHEGY QSATSDAPFE ALMLGYNIKK SNHPFFGYGM CEGGLLHNAG TCATGIGYDF
DAKVDKAGGL SVREMLVRAR ELDIDDGDFE GAAFSAGGLA RALDRAKHHE RAMDVVNEGL
AGFAQSGVTA PYAFVSLLKT RASIYFSLSK KSNDLNLARL AGADSAAALD LAKKHGLVHL
TKDVVPPEK