Gene Nham_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3790 
Symbol 
ID4029707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp4170391 
End bp4170828 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID637972194 
Producthypothetical protein 
Protein accessionYP_578968 
Protein GI92119239 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.22271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATCG CCATCGTCGA GGAAGTCGCC CGAAAGCTCG GAGGCCAAGG CGTGCTCGGC 
ACGGTCGTGC GCTCTCAGGC CGATCTGGCC CTCGCCGTCC GCAACAGGCT TCCCTTGTCT 
GTGCTACGTG GATTGAGCCA GGCTGGAATG AGCGATCAGG AGATCGAGAG GTTCGTGATC 
CCACAGCGCA CCCGCCGTCA TCGCGCCGAC AAGCAGCAGC CGCTGACGGT CGATGAGTCG 
GATCGGGCCG TGCGCCTTCT GCGCGTCCAG TCGCTGGCCG AGCAGACCTT CGGCTATCAG 
GACAAAGCGA GCCGCTGGCT TCGCCGCCCG CTCACCGAGC TAGGTGGCGA GACACCGCTC 
GTTGTCGCGC AGACCGAAGC CGGCGCACGG GTCATCGAGA CCATCCTCGG CAAGATCGCC 
TGGGGCGCCG CCGCCTGA
 
Protein sequence
MSIAIVEEVA RKLGGQGVLG TVVRSQADLA LAVRNRLPLS VLRGLSQAGM SDQEIERFVI 
PQRTRRHRAD KQQPLTVDES DRAVRLLRVQ SLAEQTFGYQ DKASRWLRRP LTELGGETPL 
VVAQTEAGAR VIETILGKIA WGAAA