Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3783 |
Symbol | |
ID | 4029700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4163252 |
End bp | 4166092 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637972189 |
Product | histidine kinase |
Protein accession | YP_578963 |
Protein GI | 92119234 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.377863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGC GACCGCAATC AAATTTCCGA GGCAAGCAGC TCGATTTCGA AGAGTTTCGC GATCTGACCT TCATCGGAAT GGCTGGTTTG ACCGACTATT TGATGAAGCC TGCCGCGCCA CCCAATCCAA ACGGGATGGT TAATTACAGG CTAGTCGCAG ACAGCCTTGG TCTCACCTAC GAGCCGGACT GGCTCGATAG GTTAGGGCAT GAGCTGGATA ACGGATATGA ATCGATAGCA TCGCATGACA GCCCATCGAA AGATCATGCC GAGGATGAGC ACTGGGTCTA CTTGAACAGT GGATTTGAGC GTATTGCATC GTTGCTTTAC GAAAAATACT ACGTGCCTCC TCCGATTCGA GACCTTAGCT ACGAGGAGTT TCGCGACGTA TTTCTCTTCG AACTCGCTGG CATGGTTCAA GATTCAATCG GAGAAGACGG ACGCTCGCAC GACCGCCAAA AGCCCTTAAG CTATGATTTG CGTGTCACTG CGGATTTCCT GAATCTGCCA CATGAGCCAG ACTGGCTTGC TCGTGTAACA TCCGAGTTTC TCGAACGGGG TTTTATCGCA AGGTCAGACG ATTCTTCAGG TAGCCCTAGA TATGCTCTAA CGCGACAAGG TTACGAACAT ACAGATCATC TCTCAGAAAA GCTGAGCGCG GGCAACGGCT TCTTGCTCTT GCACGGTGAG GGGACGCTTT TCTTCTCGGT AGACGCCAGC CACATCTCTA GGCTTGGACT CGAACTGGTC GCCAAGCAAG AAACGGCCGT GGCTGAACTC GTCAAAAACG GTTATGACGC AGATGCGACT CAGGTGGATT TGATCTTCAA CACTGCGAGC GCCCCCCAGA CATCGTTAGA GATTTACGAC AACGGTTCGG GAATGAATAT CGAGCAGCTT GAAGCGGGCT TCATGCGGTT GTCGACACCC AACAAGGTGG AACATTCGCG AAGCGAGCTG TTCGCCAGAC AAAAGGCCGG GCGTAAAGGT ATTGGCCGAT TTGCGGCTCA ACGACTCGGG CGTCGTCTCG TACTCGAAAC TACGACTCAT TCTGCTCGCA ACGGATTGCG CCTCGATATC GATTGGGATG AGTTTGTCGC CAATCGAAAT CTATCTGCCG TTCCAAGCAA AATAACCCGA ATAAAAAAGC CATTCGAGCA TGGCACACGC CTAACGATTC TAGACCTACG AGACAGCTGG TCAGATGCTC AGATTGAACG ATCCCATCGG CATATCGCTG AACTGATCCA GCCATTTCCT CTCGCTGCGG CCACCGCAAG TGGAGCAGAC CCCGGCTTTA AGGCGTCGTT CGCTCGAGAA AGGAGTGGAG ATCTTGAAAT CGTTGCGGAC GATTGGTCCG CCTTTTTTAG ACACGCACTC GCTGAAATTG AAGGCTTCGT TGATCATGCG GGAAATGCGA GTTGGACGCT GAAGTCTACT CAATTTGGAA TTGATAGCGG TCCATCAACT ATCGGACCAA ACAAGGACAC TCCTGCAGAG CCCTACCCCC ATCTAAAGAA TGTAAGGTTC AAAGCCTACT ACTACATCGA CAAAGAAACC CAACGGGCTT TCAGATCAAA AGTTGCTGAT AAACTGCAGA GTAGCGGTGG AATACGCCTC TATCGTAATG GCTTCCGGGT GCTCCCTTAT GGAGAGAGAT TCGATGATTG GTTGAAGCTG AATGCATCAA ACCTGCTGCG TAAGGTCTTG CCACCGCACA GTAACCGAAA TTTTCTGGGC TTCGTTGAGA TCAGCGATGT AGACGGCACG AACTTCGAAG AGACTTCTAG CCGCGAAGGG TTGCTGGAAA ACGAATCATT TGTGGAGCTA AAAGATTTCG TTTCTGCTGT CTTAAAAACA GCCATCCTGC CCATAGCCGC TGCTCGCGAC AGAAAGCTGA CAACCACCGA TACTCGACAG AAGCAACGTA GTCCGAAGGG ACAGGCCGAA GAACTCTTGG GGCGCCTCAG CGCTCTTCAG AAAAACGCGA ACGGGGACCC GGCCTATACT TTAGCACTGG CGCAGGTTGT TGATGCGATA CGATCCTCGG TAATCGAAAT CGGAGATACC GGTCAGGCTC TACTTGAAGA ACTCGGCATG ATGAGAGTAC TCGCAACCTT GGGGTTAACA ATCGGAGAGT TCACCCACGA AATTCGGATA ACGCTCGAGT CGGTTAAAGC GTCGGCATCA TTGCTTGCCG CGAGCGTCCA GACAGAAGCA TCTCAACCGA AACAAGCGGA TGCGCTGCTG GATAAAATTG CTGACTTCGA GGGTTACCTC ACTTACTTCG ACGCGACGGT CCGGGACAAC GTTAGCCGTG AAGTCGTCGC CTTAGAAATA CGAGACGTCG TAAATTCATT TGTGAAAGTT GTATCGCCTA AGCTCAACCG GAAAGAGCTA ACCCTGGAAA CCGCCTTCCA AGGCGTGTCA TTGTTTACCC GCCCAATGCA CAAGTCCGAG TGGGCCTCCA TCTTGATCAA TCTTTTCACA AACTCCCTCA AGGCAATTCG TCGGGCGGGC GTAAACGGTC GCATCCAAAT AGAATGCGGA CGCAACGAGG GAAACATCTT CTTGGACTTC ATGGATAATG GCGACGGGAT TCCGGCCACC GACGCTACTC GAATTTTCGA CGCGTTCTTT ACGACTACTT GGGCCACGGG AGCTTCCGCG GAAGACGGCA CTTTCGAGGG TATGGGGATG GGGCTCAAGA TTGTGAAGGA TATCGTTGAA ACCGCCCGCG GCCAGATTGC ACTGCGTCCC GCGGCCGAAG GTTTTTCAAC CTGCTTCCGC GTCAGCGTAC CAGAAGCCTC CGATGAGGAG ATCCCTGACA ATGCCTATTA G
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Protein sequence | MMARPQSNFR GKQLDFEEFR DLTFIGMAGL TDYLMKPAAP PNPNGMVNYR LVADSLGLTY EPDWLDRLGH ELDNGYESIA SHDSPSKDHA EDEHWVYLNS GFERIASLLY EKYYVPPPIR DLSYEEFRDV FLFELAGMVQ DSIGEDGRSH DRQKPLSYDL RVTADFLNLP HEPDWLARVT SEFLERGFIA RSDDSSGSPR YALTRQGYEH TDHLSEKLSA GNGFLLLHGE GTLFFSVDAS HISRLGLELV AKQETAVAEL VKNGYDADAT QVDLIFNTAS APQTSLEIYD NGSGMNIEQL EAGFMRLSTP NKVEHSRSEL FARQKAGRKG IGRFAAQRLG RRLVLETTTH SARNGLRLDI DWDEFVANRN LSAVPSKITR IKKPFEHGTR LTILDLRDSW SDAQIERSHR HIAELIQPFP LAAATASGAD PGFKASFARE RSGDLEIVAD DWSAFFRHAL AEIEGFVDHA GNASWTLKST QFGIDSGPST IGPNKDTPAE PYPHLKNVRF KAYYYIDKET QRAFRSKVAD KLQSSGGIRL YRNGFRVLPY GERFDDWLKL NASNLLRKVL PPHSNRNFLG FVEISDVDGT NFEETSSREG LLENESFVEL KDFVSAVLKT AILPIAAARD RKLTTTDTRQ KQRSPKGQAE ELLGRLSALQ KNANGDPAYT LALAQVVDAI RSSVIEIGDT GQALLEELGM MRVLATLGLT IGEFTHEIRI TLESVKASAS LLAASVQTEA SQPKQADALL DKIADFEGYL TYFDATVRDN VSREVVALEI RDVVNSFVKV VSPKLNRKEL TLETAFQGVS LFTRPMHKSE WASILINLFT NSLKAIRRAG VNGRIQIECG RNEGNIFLDF MDNGDGIPAT DATRIFDAFF TTTWATGASA EDGTFEGMGM GLKIVKDIVE TARGQIALRP AAEGFSTCFR VSVPEASDEE IPDNAY
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