| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3765 |
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| Symbol | |
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| ID | 4031727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4143950 |
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| End bp | 4147213 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972174 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_578948 |
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| Protein GI | 92119219 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCCC GTTATGCCGA GCTCCAGGTC ACGTCGCACT TCTCGTTCCT GCGGGGAGCG
TCGTCCTGCG AGGAATTGTT CGCGCATGCC GCGTCGCTCG GCATCGAAGC GCTGGCGATC
GTGGACCACA ACAGCCTCGC CGGCATCGTG CGCGCCCATG AGGCCGCCAA GGTGACCGGC
GTGCGCCTGA TCGTCGGCTG CCGCCTCGAT CTCGCCGACG GCATGTCCGT CCTGGTCTAC
CCGACTGACC GGCCGGCGTA CTCACGGCTT TGCCGGTTGC TTTCAATCGG CAAGACGCGC
GGCGGTAAAG CGAAATGCAT CTTGAACTGG GAAGATGTCG TCGACTGGTC CGAAGGTTTG
ATCGCCGCGC TTGTTCCGGA CGTGGCTGAC GATGCCTGCG CGCAGCGGAT CCGCCGCCTG
CGCGACACGT TCGGCGATCG CGCCCACATG GCACTGACGC TGCGCCGCCG CCCGAACGAT
CAGATGCGGA TCCACGAACT GAACAATATG GCACAGCGTT TTCGGGTAGC GACGGTCGTC
ACCAACGACG TGCTTTTCCA TGAGCCGGCG CGACGGATCC TGCAGGACGT CGTCACTTGC
ATCCGGCACA ACGTCACGAT CGACGAAGCC GGCTTTCGCC GTGAGCGCCA CGCAGATCGT
TATCTCAAGC CTCCGGACGA GATGACGCGA CTGTTTGCGC GTTACCCGGA AGCCCTCGCC
CGCACGGTCG CGATCGCCGG CCGGTGCACC TTCAGCATGG ACGAACTCGC CTATCAGTAT
CCGGAAGAAC GGACCATGCC GGGCCTGACA CCGCAGCAGG CGCTGGAGAA GCTGACATGG
GAGGGCGCGG CGGAGCGTTA CCCGGAGGGC CTGCCCGACG AGGTCAGGCC CACGCTCGAG
CACGAACTGA GATTGATCGA GCGGCTGCAA TATGCCCCTT ACTTCCTGAC GGTGAATTCC
ATCGTCCGTT TCGCCCGCAG CAGGGACATT TTGTGTCAGG GCAGGGGGTC TGCCGCGAAC
TCTGCCGTCT GCTACGTGCT CGGCATCACT TCGATCGATC CGGAACGCAA CGACCTCCTG
TTCGAGCGCT TCGTTTCCGA GGAGCGCCGC GAGCCGCCCG ACATCGACGT CGACTTCGAG
CACGAACGCC GCGAGATCGT GATGCAGTGG GTGTTCGAGA CCTACGGCCG CAACCATGCG
GCGCTCTGCT CGACCGTCAT CCGGTATCGC GCAAAAGGTG CGCTGCGCGA CGTCGGCAAG
GCGCTCGGAC TGACCGAGGA CCTGATCAAG CTGCTATCGT CGCAGATCTG GGGTTGGTCG
GAGGAGGGGG TAGAGCCGAA GCACGCTGAA GAACTCAATC TGAATCTCGA CGACCGACGG
CTCAAGCTGG CAATCGTTCT CGCCCGTGAA CTGATCGGGA CGCCACGGCA TCTCTCGCAG
CATCCGGGCG GCTTCGTTTT GACCCATGAC CGCCTGGACG AACTGGTGCC TATCGAACCG
GCCGCGATGC CCAACCGCCA AGTGATCGAA TGGGACAAGG ATGACATCGA TGCGCTGAAG
TTCATGAAGG TCGACTGCCT GGCACTTGGC ATGCTCACCT GCATGAAGCG CGCCTTCAAC
TTCCTGGCCG AAGCCAAGGG TACCGAACTC GATCTTGCGA CCATCCCTTC CGAGGATCCT
CGGACTTACG CCATGATCCG GAAGGCCGAC ACGCTTGGCA CCTTCCAGAT CGAGAGCCGC
GCCCAGATGG CGATGCTGCC ACGGATGAAG CCCCGGACGT TCTACGATCT TGTCATCGAG
GTCGCGATCG TGCGACCCGG GCCGATCCAG GGCGACATGG TCCATCCCTA TCTGCGCCGA
CGCGAGGGCA AGGAACCGGT CGTGTTTCCG AAGCCCGAGC TCGAGAAAGT GCTCGGCAAG
ACGCTGGGTG TGCCTCTCTT CCAGGAGCAG GCGATGCGGG TCGCCATCGA ATGCGCCGGC
TTCACGCCGG GCGAAGCCGA CCAGCTTCGC CGCGCCATGG CGACCTTTAA GTTCACCGGT
GGCGTGTCCA AATTCAAGGA CAAGCTCATC AACGGGATGG TGGATCGCGG CTACGACAGG
GAATTTGCCG AAAAGACTTT CAGCCAGCTC GAAGGTTTCG GGAGCTACGG ATTTCCCGAG
AGCCATGCTG CGTCTTTCGC GCTCATCGCC TACGCATCAT CATGGATGAA GTGTTGGCAT
CCGGACGTGT TCTGCGCCGC GCTCTTGAAC GCCCAGCCGA TGGGATTCTA CGCGCCGGCG
CAAATTGTTC GTGATGCGCG CGACCATGGC GTCGAAGTCC GGCCGGTCTG CATCAACGCC
TCGCGATGGG ATTGCACGCT GGAGCCGATC AACGACGACG GATTCGCGGT CCGTCTGGGT
TTCCGGCTGA TCCGTGGGCT ATCCAACAAG AACGGCGCGG AAATTGTCGC CGCCCGGGCC
GACCAGCCAT TCGAATCCGT CGACGATCTC TGGCGCCGTG CGGATATCCC GGTTGCATCG
CTGGTGCAGT TGGCGAAAGC CGATGCGATG AATGAATCGC TAGGGCTGGC ACGGCGGGAG
GCGCTGTGGG CGCTCAAAGC GCTGCGGGAT GAACCGCTGG AATTGTTCGC CGCCGCCACG
CAGCGGGAGG CCCGGACCAT CGAGGAAGTT CGCGAGCCGG CCGTGTCGTT GCGGCTGATG
ACGTCCGGAG GCGAGGTCGT CGAGGATTAC CGGCACGTGG GCCTCACGCT GCGGCAACAC
CCGGCGAGCT TCCTGCGGGC GGACCTCTCA AGCCGTCGCA TCGTTACCTG CGCCGACGCG
ATGAATGCCT GCGACGGCAA GTGGCTGACG ACCGCCGGCC TAGTGCTGGT GCGTCAGAAG
CCAGGGTCAG CCAAGGGCGT CATGTTCATC ACGATTGAGG ACGAGACCGG CGTGGCCAAC
CTGGTGATCT GGCCGTCGCT CTATGAACGC CAGCGCCGCA TCATCCTCGC CGCAAGGATG
ATTGCCGTTC AGGGACGCAT TCAGCGCGAG GGCGAGGTCG TGCACCTCGT CGCCAATCAT
CTGACCGACC TGTCGGCGGA CCTCGCCGGC GTTGGAGACC GCGATGACGC ATTCCCGCTA
TCCCTCGAGC GCGGCGACGA ATTCCATCAC GGCAGTTCCG GTATTGACCC GCGCAGCGTG
CCGAAGGGGC CGAGCTCCCG GGACATCTAC GTGCCGGACC TGCGCACCGA CAGCATCAAG
GTGAAGTCGC GGGATTTCCG GTAG
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| Protein sequence | MTSRYAELQV TSHFSFLRGA SSCEELFAHA ASLGIEALAI VDHNSLAGIV RAHEAAKVTG
VRLIVGCRLD LADGMSVLVY PTDRPAYSRL CRLLSIGKTR GGKAKCILNW EDVVDWSEGL
IAALVPDVAD DACAQRIRRL RDTFGDRAHM ALTLRRRPND QMRIHELNNM AQRFRVATVV
TNDVLFHEPA RRILQDVVTC IRHNVTIDEA GFRRERHADR YLKPPDEMTR LFARYPEALA
RTVAIAGRCT FSMDELAYQY PEERTMPGLT PQQALEKLTW EGAAERYPEG LPDEVRPTLE
HELRLIERLQ YAPYFLTVNS IVRFARSRDI LCQGRGSAAN SAVCYVLGIT SIDPERNDLL
FERFVSEERR EPPDIDVDFE HERREIVMQW VFETYGRNHA ALCSTVIRYR AKGALRDVGK
ALGLTEDLIK LLSSQIWGWS EEGVEPKHAE ELNLNLDDRR LKLAIVLARE LIGTPRHLSQ
HPGGFVLTHD RLDELVPIEP AAMPNRQVIE WDKDDIDALK FMKVDCLALG MLTCMKRAFN
FLAEAKGTEL DLATIPSEDP RTYAMIRKAD TLGTFQIESR AQMAMLPRMK PRTFYDLVIE
VAIVRPGPIQ GDMVHPYLRR REGKEPVVFP KPELEKVLGK TLGVPLFQEQ AMRVAIECAG
FTPGEADQLR RAMATFKFTG GVSKFKDKLI NGMVDRGYDR EFAEKTFSQL EGFGSYGFPE
SHAASFALIA YASSWMKCWH PDVFCAALLN AQPMGFYAPA QIVRDARDHG VEVRPVCINA
SRWDCTLEPI NDDGFAVRLG FRLIRGLSNK NGAEIVAARA DQPFESVDDL WRRADIPVAS
LVQLAKADAM NESLGLARRE ALWALKALRD EPLELFAAAT QREARTIEEV REPAVSLRLM
TSGGEVVEDY RHVGLTLRQH PASFLRADLS SRRIVTCADA MNACDGKWLT TAGLVLVRQK
PGSAKGVMFI TIEDETGVAN LVIWPSLYER QRRIILAARM IAVQGRIQRE GEVVHLVANH
LTDLSADLAG VGDRDDAFPL SLERGDEFHH GSSGIDPRSV PKGPSSRDIY VPDLRTDSIK
VKSRDFR
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