Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3748 |
Symbol | |
ID | 4032485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 4127410 |
End bp | 4129335 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637972157 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_578932 |
Protein GI | 92119203 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.159285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTC AGGAGAAGAG CCGCTACCGC GAGGTCTACG CCCGCGCGCT TAGCGATCCC GACGGGTTCT GGGCCGACGC CGCGCGCGAC ATCGACTGGA TCGAGCCGGC GAAAAAGACC TTCGACCCCG CGATGGGGCT TTATGGCCGC TGGTTCGCCG GCGCCGTGGT CAATACCTGC TACAACGCGC TGGACCGCCA TGTCGCCGCC GGCCGGGCCG ATCAGGTCGC GCTGATCCAT GATTCGCCGC TGGCCAATCC GGGCGGGCCG AGCGTCATTA CCACCTTCAC CTATGCCGAA CTGCTCAAGG AGGTGCAGAC GCTCGCCGCG GTCATGCAGG ATTTCGGCGT CGCCAAGGGC GACCGCGTCG TACTTTACAT GCCGATGGTG CCCGAGGCGG TGGTGGCGAT GCTGGCCTGC GCGCGGATAG GCGCGGTGCA CTCCGTGGTG TTTGGCGGCT TTGCGGCCAA GGAGCTTGCG ACCCGGATCG ACGATGCCAA GCCGAAGCTG ATCTTTTCAG CGAGTTGCGG CCTGGAGCCG GGCCGCATCG TGCAGTACAA GCCGCTGCTC GACGAGGCAC TGAAACTTGC CACCGCCGGG CCCGGCGCGT GCATCATCCT GCAACGGCCG CAGCAGCGCT GCGACTTGAT CGCGGGCCGC GATCACGACT GGACGACGCT GCGCGATGCC GCGATGGCGG CGAAGAAGTC CGCGCCTTGC GTGCCGGTGC TCGCCACCGA TCCGCTCTAT ATTCTCTACA CTTCCGGCAC CACCGGGGTG CCGAAAGGCG TGGTGCGCGA CAATGGCGGC CATCTGGTCG CGCTGAAATG GTCGATGTTC AACCTCTATG GCGTCAAGCC CGGCGAGGTC TGGTGGTGCG GCTCCGATAT CGGCTGGGTG GTCGGCCACA GCTACATCGT CTACGGGCCG CTGATTCACG GCACGACCAC GATCATGTAC GAAGGCAAGC CGATCGGCAC GCCCGATGCC GGGGCGTTCT GGCGCGTTAT CGCGCAGCAC AAGGTGGTGG CGTTCTTCAC CGCGCCGACC GCGTTCCGCG CCATCAAAAA GGAGGACCCG GACGGGGCCT TCATCCGCAA ATATGATCTG TCCGAATTCC GCACGCTGTT TTTGGCTGGT GAGCGCGCCG ATCCGCCGAC GGTGGAATGG GCGGAGAAGC AGTTGAAGGT GCCGGTGATC GATCACTGGT GGCAGACCGA AACCGGCTGG GGCATCGTCG GCAACCCGGT CGGGCTCGGG CAACTGCCGG TCAAACACGG CTCGCCCACG GTCGCGATGC CGGGCTATCA GGTCGATATC GTCGATGAGG CTGCGAAGCC GCTGCCGGCC GGCACCATGG GTTCGATCGT TATCAAGCTG CCGCTGCCGC CGGGCTGCCT GCCGACCTTG TGGCAGCAGG ACGAACGCTG CAAGGAAGCC TATTTCAACG AGTTTCCCGG CTACTACAAA ACCTCCGACG CGGGCTACAA GGACGAGGAC GGCTACATCT TCGTCATGGG CCGCACCGAC GACATCATCA ATGTCGCCGG TCATAGGCTG TCCACCGGCG GCATGGAGGA AATTCTCGCC TCGCATCCCG ATGTCGCGGA ATGCGCGGTG CTCGGCATCA GTGACACCAT CAAGGGCGAG GTGCCGTGCG GCCTCTTGGT GTTGAAGGCC GGCGTGACGC GCGACGGCGC CGAGATCGAG AAGGAGGTCG TGGCGCTGGT GCGCGAGAAG CTCGGTCCGG TCGCGGCATT CAAGCTCGCG ATCACGGTGA ACAGGCTGCC GAAGACGCGC TCCGGAAAAA TCCTGCGCGG CACCATCAAG AAGATCGCGG ATGGCGAGGC ATGGACGATG CCCGCGACCA TCGAGGATCC GAAGGTGCTC GACGAGATTC AAAGCGCGTT AAAGAGCAGG ATGTAG
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Protein sequence | MSIQEKSRYR EVYARALSDP DGFWADAARD IDWIEPAKKT FDPAMGLYGR WFAGAVVNTC YNALDRHVAA GRADQVALIH DSPLANPGGP SVITTFTYAE LLKEVQTLAA VMQDFGVAKG DRVVLYMPMV PEAVVAMLAC ARIGAVHSVV FGGFAAKELA TRIDDAKPKL IFSASCGLEP GRIVQYKPLL DEALKLATAG PGACIILQRP QQRCDLIAGR DHDWTTLRDA AMAAKKSAPC VPVLATDPLY ILYTSGTTGV PKGVVRDNGG HLVALKWSMF NLYGVKPGEV WWCGSDIGWV VGHSYIVYGP LIHGTTTIMY EGKPIGTPDA GAFWRVIAQH KVVAFFTAPT AFRAIKKEDP DGAFIRKYDL SEFRTLFLAG ERADPPTVEW AEKQLKVPVI DHWWQTETGW GIVGNPVGLG QLPVKHGSPT VAMPGYQVDI VDEAAKPLPA GTMGSIVIKL PLPPGCLPTL WQQDERCKEA YFNEFPGYYK TSDAGYKDED GYIFVMGRTD DIINVAGHRL STGGMEEILA SHPDVAECAV LGISDTIKGE VPCGLLVLKA GVTRDGAEIE KEVVALVREK LGPVAAFKLA ITVNRLPKTR SGKILRGTIK KIADGEAWTM PATIEDPKVL DEIQSALKSR M
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