| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3745 |
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| Symbol | ispH |
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| ID | 4032482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4124726 |
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| End bp | 4125700 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972154 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_578929 |
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| Protein GI | 92119200 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.282827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCA CCATGAATGC CAAACCGAAG CTTAAAATCG TGCTTTGTTC GCCCCGCGGC
TTTTGCGCCG GAGTGGTCAG GGCGATCGAT ACCGTGGAAC GTGCGCTGAC GCTGTACGGC
GCGCCGGTCT ATGTGCGCCA CGAGATCGTC CATAACCGCT ATGTGGTCGA CAGCCTGCGT
GCGAAGGGGG CGATTTTCGT CGAGGAACTG GCGGAAATCC CCGATGACAC CAAGGCGCCG
GTGGTGTTCT CCGCCCATGG CGTACCGAAA TCGGTGCCGG CCGACGCGCA GAAGCGCAAT
TTCTTTTCGC TGGATGCGAC CTGCCCGCTG GTGACCAAGG TTCACCGCGA GGCGGCGATC
CATTTCAAGC GCGGGCGGGA GATCCTGCTG ATCGGCCATT CCCATCACCC GGAAGTCGTC
GGCACGGTCG GGCAATTGCC GGCGGGCGCG GTGACGCTGA TCGAGACCGC CGAAGATGCC
GCCACATTCA TGCCGAAGAA TCCCGAAAAC CTCGCGTTCG TGACCCAGAC GACGCTGTCG
ATCGACGACA CCGCCGAGAT CGTTGCGATG CTGAAGCAGC GGTTCCCGAA CATTTCCGGC
CCGCACAAGG AGGACATCTG CTACGCCACC ACCAACCGCC AACTCGCGGT CAAGAAAGTG
GCGCCGGTGG TGGATGCGCT GATCGTGGTC GGCGCGCCGA ACTCGTCGAA CTCGCAGCGG
CTGCGCGAGG TCGCCGAGCG CGAGGGCTGC AGGGTGTCGG TGCTGGCGCA GCGCGCCAGC
GATCTCGACT GGAACAGCTT CGAGGGCATT AAGAGCCTCG GCATCACCGC AGGCGCCTCG
GCACCGGAAG TGATCGTCGA GGAAATCATG GGTGCGTTCG CTGCGCGCTA TGACCTCGAT
GTCGAGACGG TCTCGGCTGC GGAAGAGAAC GAGTTTTTCC CGCTGCCGCG CTCGCTGCGG
CCCGACGCGG CCTAG
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| Protein sequence | MNATMNAKPK LKIVLCSPRG FCAGVVRAID TVERALTLYG APVYVRHEIV HNRYVVDSLR
AKGAIFVEEL AEIPDDTKAP VVFSAHGVPK SVPADAQKRN FFSLDATCPL VTKVHREAAI
HFKRGREILL IGHSHHPEVV GTVGQLPAGA VTLIETAEDA ATFMPKNPEN LAFVTQTTLS
IDDTAEIVAM LKQRFPNISG PHKEDICYAT TNRQLAVKKV APVVDALIVV GAPNSSNSQR
LREVAEREGC RVSVLAQRAS DLDWNSFEGI KSLGITAGAS APEVIVEEIM GAFAARYDLD
VETVSAAEEN EFFPLPRSLR PDAA
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