| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3734 |
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| Symbol | |
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| ID | 4030069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4113108 |
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| End bp | 4114790 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972143 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_578918 |
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| Protein GI | 92119189 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.862355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCA TCTGGCTCAG TCAATATCCC GCAGGCGTGC CCGCCGACAT CGACGCGTCG
CAGTACGCCT CGCTGGTCGC GTTGCTTGAA GAGAGCTTCG CCAAATTCCG CGATCGCAAG
GCCTTCATCT GCATGGGCAA GGCGATCACC TATCGCGAGA TCGACGAGAT GTCGCTTGCA
CTCGGCGCCT GGCTGCAAGG CCGGGGACTG AAAAAGGGCG CGCGCGTTGC GCTGATGATG
CCGAACGTGC TGCAATATCC GGTCTCGACG GTGGCGGTGC TGCGCGCCGG CTATGCCGTG
GTCAACGTCA ACCCGCTCTA CACACCGCAC GAGCTTGAGC ACCAGCTCAA GGATTCCGGC
GCGGAAGCGA TCATCGTACT GGAGAATTTC GCGTCGACGG TGCAGCAGGC GATCGGCAAA
ACTAACATCA GGCACGTCAT CGTCGGCAGC ATGGGCGACC TGCTCGGCTT CAAGGGCCTG
ATCGTCAATT TCGTGGTTCG TCATGTCAGG AAGATGGTGC CGCCGTCATC GATCCCGGGG
GCGGTCAAGT TCAACGACGC CCTCGCGGCC GGGCGCGGCA TGACGCTTGC CAGGCCGAAC
CTCGCGCCCG ACGACGTCGC CTTCCTGCAG TATACCGGCG GCACCACCGG CGTCGCGAAG
GGCGCGACGC TGCTTCATCG CAATATTCTC GCCAACATGC TGCAGAACGA CGCCTGGCTG
CAGCCGGCGC TGAGGAAACC GCCGGTGGTC GATCAACTCT TCGTCGTCTG CGCGCTGCCG
CTCTATCACG TCTTCGCGCT GACGGCGTGC TTCATGCTGG CGATGCGCGC GGGCGGCGTC
AATCTGCTGA TCCCGAACCC GCGCGACATG CCCGGCCTCG TCAAGGAATT GATGAAGTAT
CAGATCAACT GCTTTCCGGC GGTGAACACG CTCTATAACG GCCTTCTCAA TGCGCGCGGT
TTCGACAAGG TCGACTTCTC GAAACTCAAG GCTTCGGTCG GCGGCGGCAT GGCGGTCCAG
AAGGCGGTGG CGGAGAAGTG GCTGAGGGTG ACAGGATGCC CGCTACTGGA AGGCTATGGC
CTTTCGGAAA CCTCGCCGAC GCTGACCTGC AATCCCGCCG ACACCGGCAA ATTCTCCGGC
TCGATCGGGC TTCCCATGCC GTCGACATAC ATTTCCATCC GCGACGACGA CGGCCGCGAG
GTGCCGCTCG GCGAGGCGGG CGAAATCTGC GCCAAGGGTC CACAGGTGAT GCCGGGCTAC
TGGAACCGGC CGGACGAAAC CGCAAAGGTG ATGACGGCGG ACGGCTTCTT CCGTACCGGC
GACATCGGCG TGATGTCAGC CGACGGCTAC ACCAGGATCG TCGACCGCAA GAAGGACATG
ATCCTGGTCT CCGGCTTCAA TGTCTATCCG AACGAGATCG AGGACGTGAT CGCGAGCCAT
CCGGGCGTGC TGGAATGCGC GGTGATCGGC GTCAAGGACA GGAAGTCGGG CGAGGCGGTG
AAGGCTTTCG TGGTCAGGAA GGACCCGACC CTCACGCGCG CGGACATCAT CAAGTTCGCG
CATACGCAGT TGACCGGCTA CAAGGTGCCC AGACAGATCG AGTTCCGCGA CTCCCTGCCG
AAAACCAACG TCGGCAAGAT CCTCCGCCGC GAACTGCGTG ACGAGAAAAA AGCGGCGGCG
TGA
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| Protein sequence | MDRIWLSQYP AGVPADIDAS QYASLVALLE ESFAKFRDRK AFICMGKAIT YREIDEMSLA
LGAWLQGRGL KKGARVALMM PNVLQYPVST VAVLRAGYAV VNVNPLYTPH ELEHQLKDSG
AEAIIVLENF ASTVQQAIGK TNIRHVIVGS MGDLLGFKGL IVNFVVRHVR KMVPPSSIPG
AVKFNDALAA GRGMTLARPN LAPDDVAFLQ YTGGTTGVAK GATLLHRNIL ANMLQNDAWL
QPALRKPPVV DQLFVVCALP LYHVFALTAC FMLAMRAGGV NLLIPNPRDM PGLVKELMKY
QINCFPAVNT LYNGLLNARG FDKVDFSKLK ASVGGGMAVQ KAVAEKWLRV TGCPLLEGYG
LSETSPTLTC NPADTGKFSG SIGLPMPSTY ISIRDDDGRE VPLGEAGEIC AKGPQVMPGY
WNRPDETAKV MTADGFFRTG DIGVMSADGY TRIVDRKKDM ILVSGFNVYP NEIEDVIASH
PGVLECAVIG VKDRKSGEAV KAFVVRKDPT LTRADIIKFA HTQLTGYKVP RQIEFRDSLP
KTNVGKILRR ELRDEKKAAA
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