Gene Nham_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3728 
Symbol 
ID4030062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4107929 
End bp4108828 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID637972137 
Productperiplasmic binding protein 
Protein accessionYP_578912 
Protein GI92119183 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGT TGGCGCGGTT GCAGCGCCTC AGTGAGGCGA TCCGGGCCGG CATCGCCGGA 
CGCAGATGCG GCGGTCTTGC CGCGGCCGCT CTCGCATTGA CCGCCGGGGT CGTCACGCAG
ACGCAGGCCG CCGATCCGCA GCGCGTCGCC TCGATCAACC TGTGCACCGA TCAGCTCCTG
ATGACGCTTG CCGATCCCGC CCAGATCCTC GGCCTCAGCC CTTATTCGCG GGATGCAGCG
CGCTCCTGGG CCGCGACGGA GGCGAAGAAA TATCGGCGGC TTTCCGGGGA GGCGGAGGAT
GTGCTGATGC TCAGGCCGGA TGTTGTCGTC GCCAGCCGCT ACATGAAGCG AACGACGCGC
GAGTTGCTGA AACAGCAGGG GATGCGCGTG GCCGAGTTCG ATATCGCAAA ATCGATCGAC
GACGTGAAGG AGCAGATTCG CCGGATGGGC GATCTTGTCG GGCACCCGGA TCGCGCGGAA
GCCCAGATCG CGCGGCTCGA TGCGGCGATT GCCCGCGCGA GGGAGGCAGT GGGGCGCAAG
CCCTATCGGG TGCTGGCGCT GTCGCGACGC GGCTGGGTTT CGGGCGATGA CAGCGTCACC
AGCGCGTTGC TCTCGATCAC CGGGTTGTCG AATGCCGCGT CCGGCCTTGA CATCAGCTCC
GGCGGGTTTG CCAAGCTGGA AACCATTGTT GCCGATCGGC CGGACTTTAT CCTGATATCC
GACGACAGCG ACGTCGCGGA TGACGAAGGA AGCGCGCTGC TGCTGCATCC GGCGCTGGAA
AAACTGTATC CGTCGTCGCG GCGCATCGTG ATTCCCGAAG ACCTCACGGT GTGCGGCGGG
CCGATGCTCG CCGATGCGCT GGACCGGCTG GTCGCGGAGC TGAAGCGCGT CGGGGGCTAG
 
Protein sequence
MSLLARLQRL SEAIRAGIAG RRCGGLAAAA LALTAGVVTQ TQAADPQRVA SINLCTDQLL 
MTLADPAQIL GLSPYSRDAA RSWAATEAKK YRRLSGEAED VLMLRPDVVV ASRYMKRTTR
ELLKQQGMRV AEFDIAKSID DVKEQIRRMG DLVGHPDRAE AQIARLDAAI ARAREAVGRK
PYRVLALSRR GWVSGDDSVT SALLSITGLS NAASGLDISS GGFAKLETIV ADRPDFILIS
DDSDVADDEG SALLLHPALE KLYPSSRRIV IPEDLTVCGG PMLADALDRL VAELKRVGG