| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3719 |
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| Symbol | |
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| ID | 4030589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4097687 |
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| End bp | 4099948 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637972129 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_578904 |
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| Protein GI | 92119175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.525992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATGTG GAATTGCACG TCACAAGAAA ACGCTTCTGG GTGCGGCAAG CGCGCTTGCG
CTAATGCTTG ACGGTGGAGA TACGGCCATT GCGCAGACGG AGCACGAACT GCCTGCTGTG
CGAGTTCAAG CGTCCACTCC GCGTCCGGCT CGTCGCGCGA CTGCGCGTCA AAACGCCGTA
CGGACGCCCG TTGCAGCTCC TCGTGTTGTT GAGCGCCACG CTCCCGTAAC ACCACCGACC
GGAATGATCG GCGCTTTGCC TCCGGCCTAT GCGGGTGGTC AGGTGGCGTC GGGCAGCCAG
GTCGGCCTCC TTGGCAATCG TAGTGTAATG GACACGCCGT TCAACCAGAC AAGTTACACT
GCCCAGACAA TCCAGGATCA GCAGGCGCGC AAACTCGACG ACGTGCTCGC CAACGATCCG
TCTACCCGCT CCAACGCGCC GCGCGCCTAT GGCTTTGACT TTGTCTCTAT CCGTGGCTTC
GACGTACCAA GCTCGGCCTA TGGCATCAAT GGGCTGTACG GCCTTGCATC AGCCTTCTCT
TTCTCGTCGC TTGCAGCGAT CGAGCGTGTC GATGTGCTGA AAGGGCCCGG CGCGGTGCTG
AGTGGCATGC CGCCGGATGG TGGTGTGGGC GGCAGTATCA ATCTTGTCAC CAAGCGAGCC
GGCGACAACC CGATCGCGCG GATGACCAAC ACCTATGCCT CACGCGGGCA GTTTGGCACG
CATGTTGATG TCGGCCGCCG GTTCGGCGAG GCTGACGAAT TCGGCGTACG GTTCAATGGC
AGCTATCGCA ACGGCGCTAC CGAACTCGCC AACCAGAGTC AGGAACTTGG AACGGCGGCG
CTTGGCCTCG ATTATCGCGG CGAGCGCGTT CGTTTATCGG CGGATTTTGG TTACGAGAAG
AACTACGTCG ATGCGATGAC GCGTTTCGTC GTGTTTGGCC CCGCTCTGAC TGCTGTGCCA
GTACCGCCGG ATGCTCGCGC AAGCTTCGTG CCGAGTTGGG GTTATTGGAA GAGTGAGGGC
AAGTTTGGCC TCGTACAGGG CGAGGTCGAT CTCACCGAGA ACCTTACTGC CTATGCGCAG
GCGGGTGTGG TCAGTAGTGA GAGTAAATAT CGGTACTCGG ATATTACGCT CACCAACCTT
AACGGTAATT TCGATGGTTC GCCGCGATTG AATAGCCAGA CGCGCGAGCA GGTGGCAGCG
CAGACTGGTC TTCGTGCCTC TGTGGATACC GGACCGTTCA ATCACGCGAT CAACCTCAAC
GCGACCATAT CCGAGGGTGT AGTTGGCATC ATCAACACTC GAGGTACGGC GTTTTCGTCC
AATCTCTACA ATCCACGTCC GAGCCCGATG CCACTGATTT CGGTCGGCGC TCCCCCGAAA
ATTTCAGACT CGCGGTTGTC GAGCTTGGGC ATCGCCGACA CGATTTCGAT GTGGGACAAG
CGCGTTCAGT TGACGGTCGG CGTACGCCAA CAATATGTCG AGAGCAATTC GTTCAGCGCG
ACCACGGGAT CGCGCACCGG TGGTTACGAT GCCTCTGCAA CGACCCCCGC TTATGCGTTG
GTCGTCAAGC CTCTGGAAAA CGTTTCCCTC TATGCGAACT ACATCGAGGG GCTGGAATCC
GGCACCGTGG TTGGCGCGCA ATACGCCAAT GCCGGCGAGG TGTTGTCACC GTATCGGACC
CGGCAATATG AGGCGGGCGT CAAAGTCGAT TGGGGGCGGG TCACCACGAC CCTCAGCGCC
TTCGACATTA CCCGGCCGCT GCAGCTTGTC GACCTTGCCA GCAATACGTT GACGCAGGAT
GGCGAGAGCC GCAACCGCGG CGTCGAGCTT AACGCTTTCG GTGAGTTGGC CCCGGGCGTT
CGGCTGCTCG GCGGAATCAT GCTCATCGAT GCGCGGCAGG AGAAGACCCA GGCTGGGCAG
TATGATGGTT ATCGTACCTT CAGCGTCCCC GACACCCAGC TCAATCTCGG CGGCGAGTGG
GACCTGCCGT TCCTTCGCGG ATTCACGTTG ACCGGACGCG CGATCCACAC CGGCAGCTTC
TTTTCAGATC AAGCGAACAG TTTGCTGGTC TCGAACTGGA CCCGCTACGA CGCCGGTGTA
CGCTATACCT TTGCGTCGCC ATGGAACAGC AAGCCGGTGG TTGTGCGATT CCAGGTCGAG
AACCTCCTCG ACAACAACTA CTGGCAGGGT GCGAACACCA ACAGATACGT CTTTCTCGGT
GCGCCGAGAA CCTATCTGCT GTCCACAACC TTCAACTTCT AA
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| Protein sequence | MACGIARHKK TLLGAASALA LMLDGGDTAI AQTEHELPAV RVQASTPRPA RRATARQNAV
RTPVAAPRVV ERHAPVTPPT GMIGALPPAY AGGQVASGSQ VGLLGNRSVM DTPFNQTSYT
AQTIQDQQAR KLDDVLANDP STRSNAPRAY GFDFVSIRGF DVPSSAYGIN GLYGLASAFS
FSSLAAIERV DVLKGPGAVL SGMPPDGGVG GSINLVTKRA GDNPIARMTN TYASRGQFGT
HVDVGRRFGE ADEFGVRFNG SYRNGATELA NQSQELGTAA LGLDYRGERV RLSADFGYEK
NYVDAMTRFV VFGPALTAVP VPPDARASFV PSWGYWKSEG KFGLVQGEVD LTENLTAYAQ
AGVVSSESKY RYSDITLTNL NGNFDGSPRL NSQTREQVAA QTGLRASVDT GPFNHAINLN
ATISEGVVGI INTRGTAFSS NLYNPRPSPM PLISVGAPPK ISDSRLSSLG IADTISMWDK
RVQLTVGVRQ QYVESNSFSA TTGSRTGGYD ASATTPAYAL VVKPLENVSL YANYIEGLES
GTVVGAQYAN AGEVLSPYRT RQYEAGVKVD WGRVTTTLSA FDITRPLQLV DLASNTLTQD
GESRNRGVEL NAFGELAPGV RLLGGIMLID ARQEKTQAGQ YDGYRTFSVP DTQLNLGGEW
DLPFLRGFTL TGRAIHTGSF FSDQANSLLV SNWTRYDAGV RYTFASPWNS KPVVVRFQVE
NLLDNNYWQG ANTNRYVFLG APRTYLLSTT FNF
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