| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3697 |
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| Symbol | |
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| ID | 4030683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4069361 |
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| End bp | 4070596 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972107 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_578883 |
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| Protein GI | 92119154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.891893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTTTAA CATTCGCTCA AGAGGCGCCA CCGAAACATT ATGCGAATGT TGGAATCGGA
CCACTGGTGG CCACCGACGC TCTCTCCATC GCTCGCGACC TCGTCCGCTG CCCGTCGGTG
ACGCCGGCCG ACGCAGGCGC TCTCGGCGTG CTTGAGAAGC TGCTCGGCGA TGCCGGTTTC
GAGGTTCACC GCGTCACCTT CAGCGAACCC GGCGCCGCCG ACATCGACAA TCTGTATGCC
CGTATCGGCG CCACCGGCCC CCACATCGCG TTCGCCGGCC ATACCGATGT CGTGCCTCCC
GGTGACGAGT CGGCATGGAC CCATGGCGCG TTTTCCGGCG AGGTGAAAGA CGGCTTCCTC
TACGGGCGCG GCACCGTGGA CATGAAGGGC GGCATCGCCT GCAGCGCCGC CGCCACGCTG
GAATATCTGG AGGCGCACGG CGGTCGGCCG GGGAAAGACG GCAACGGCTC GATCTCGTTT
CTGATCACCG GCGACGAGGA AGACATCGCC GTCAATGGCA CCGTCAAGCT GATGCAATGG
GCGGCCGCGC GCGGTGAAAA ATTCGATCAC TGCGTGCTCG GCGAGCCCAG CAATGTTGCC
GAACTCGGCG ACTGCATCAA GATCGGCCGC CGTGGCTCGC AGTCCGGCAC GCTGTATGTC
GAGGGCGTGC AGGGCCACGT CGCTTATCCG CACCGCGCGT CAAATCCGAT TCCGGACATC
GCCGCGCTGA TCACCGCGCT CGTCAGCGAG CCGTTGGATC AGGGCAGCGC GCAGTTCCAG
CCGTCGAATC TGGCGTTCAC CTCCGTCGAT GTCGGCAATC CTGCGAACAA TGTGATTCCC
GGACAGGCGC GGGCGAAATT CAACGTCCGC TTCAACGATC ATCATAATCA GGAATCGCTC
CGTGCGCTGA TCGAAGCGCG TGTCGCCAAG GTCTCGGGCA ATCGCATTCG GACCCGGATC
GTGTGGGAGC CCTCGAATGC CGATGTGTTC GTGACCAGAC CGGGCCCGTT CACCGATCTC
GTGGTCGCGG CGATCGAGGA GGTGACCGGC CGCAGACCGG AGCTGAACAC CGGCGGCGGC
ACGTCGGATG CGCGTTTCAT CAAGGACTAC TGCCCGGTGA TCGAATTCGG CCTGGTCGGA
CAGACCATGC ACCAGATCGA CGAGCGCGCG CCGGTAGCCG ATCTCGAAAA GCTGACCCGT
ATCTACCACG GCGTACTGGA TCGCTATTTC GCATGA
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| Protein sequence | MILTFAQEAP PKHYANVGIG PLVATDALSI ARDLVRCPSV TPADAGALGV LEKLLGDAGF
EVHRVTFSEP GAADIDNLYA RIGATGPHIA FAGHTDVVPP GDESAWTHGA FSGEVKDGFL
YGRGTVDMKG GIACSAAATL EYLEAHGGRP GKDGNGSISF LITGDEEDIA VNGTVKLMQW
AAARGEKFDH CVLGEPSNVA ELGDCIKIGR RGSQSGTLYV EGVQGHVAYP HRASNPIPDI
AALITALVSE PLDQGSAQFQ PSNLAFTSVD VGNPANNVIP GQARAKFNVR FNDHHNQESL
RALIEARVAK VSGNRIRTRI VWEPSNADVF VTRPGPFTDL VVAAIEEVTG RRPELNTGGG
TSDARFIKDY CPVIEFGLVG QTMHQIDERA PVADLEKLTR IYHGVLDRYF A
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