| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3695 |
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| Symbol | truA |
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| ID | 4030681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4067893 |
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| End bp | 4068630 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637972105 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_578881 |
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| Protein GI | 92119152 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.817214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCGCT ACAAGCTCAC CATCGAATAT GACGGCGGCC CGTTCTGCGG CTGGCAGTAT
CAGGACAACG GCCCCTCGGT GCAGGGCGCT TTGGAGGCGG CGGTGAAGGC GATCTGCGGC
GACGCCGTTC GCGTGCATGG CGCCGGCCGC ACCGATGCCG GCGTCCACGC GCTGGCGCAG
GTCGCCCATT GCGACATCGC CAAGCATTTC GCGCCGAACC GGTTGCGCGA CGGGCTCAAC
GCCCATCTGC GGCCGCATCC GATCGGGGTG CTCACGGCCG AAATCGTGCC CGACACTTTC
GAGGCGCGCT TCTCGGCGCT CAGGCGGCAT TACGTCTATC GCATCGCCAA CCGCCGTGCG
AATCTGGCGA TCGATGTCGG CCACGTCTGG CGTGTGCCGC GCCCTCTCGA TACGTTGGCG
ATGCACGCGG CGGCGCAACG GTTGATCGGC AAGCACGACT TCACGACGTT TCGCGACACC
GAATGCCAGG CAAAATCGCC GGAGAAGACT CTCGACCAGC TCGACGTCGT CAGGAACGGC
GACACCGTCA CCATCGTCAC CTCGGCGCGG TCGTTCCTGC ACAGCCAGGT TCGCTCGATG
GTGGGATCGC TGGTCTGGGT CGGGCATGGC CGCTGGAGCG CCGACGATCT GTCCAACGCG
CTGGCCGAGC GCCGCCGCGA GGCCTGCGGC CCGGTCGCGC CGCCCGACGG GTTGTATCTG
GTGCGGGTGG ATTATTAG
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| Protein sequence | MPRYKLTIEY DGGPFCGWQY QDNGPSVQGA LEAAVKAICG DAVRVHGAGR TDAGVHALAQ
VAHCDIAKHF APNRLRDGLN AHLRPHPIGV LTAEIVPDTF EARFSALRRH YVYRIANRRA
NLAIDVGHVW RVPRPLDTLA MHAAAQRLIG KHDFTTFRDT ECQAKSPEKT LDQLDVVRNG
DTVTIVTSAR SFLHSQVRSM VGSLVWVGHG RWSADDLSNA LAERRREACG PVAPPDGLYL
VRVDY
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