Gene Nham_3689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3689 
Symbol 
ID4030675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4061543 
End bp4062268 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID637972100 
Productacetoacetyl-CoA reductase 
Protein accessionYP_578876 
Protein GI92119147 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAG TAGCACTGGT GACGGGGGGA ACGCGGGGTA TCGGCGGCGC GATCAGCAAG 
GCGCTGAAAG CCGCCGGATA CAAAGTCGCG GCGAGCTACG CCGGCAACGA TGCCGCGGCG
GAGAAGTTCA AGACGGAGAC CGGCATCCCC GTCTACAAAT GGGACGTCAC CTCCTTTGAG
GCCTGCACCG AGGGCGTCAG GAAGGTCGAG GCGGAACTCG GCCCCATCGA GGTGCTCGTG
AACAATGCCG GCATCACCAA GGACGGCGCC TTCCACAAGA TGACGCTGGA ACAGTGGAGC
GCCGTCATCA ACACCAATCT CGGCTCGCTG TTCAACATGA CGCGCCCGGT GATCGAAGGC
ATGCGCGCGC GCAAGTTCGG CCGCATCATC AACATCTCCT CGATCAACGG CCAGAAAGGC
CAATTCGGCC AGGTGAACTA TTCGGCGGCG AAGGCCGGCG ACATCGGCTT CACCAAGGCC
CTGGCGCTGG AGAACGCCAA GGGCGGAATC ACGGTGAACG CGATCTGCCC GGGTTACATC
AACACCGAAA TGGTGCAGGC TGTGCCGAAG GACGTCGTCG AGAAGAGCAT TCTGCCGCAC
ATCCCGGCAA ACCGTCTTGG CGAGCCCGAG GAGATCGCGC GCGCGGTGGT GTTCCTCGCC
GACGACGACG CCGGCTTCAT CACCGGGTCG ACGCTCTCCG TCAACGGCGG GCAGTATCAG
GCGTGA
 
Protein sequence
MARVALVTGG TRGIGGAISK ALKAAGYKVA ASYAGNDAAA EKFKTETGIP VYKWDVTSFE 
ACTEGVRKVE AELGPIEVLV NNAGITKDGA FHKMTLEQWS AVINTNLGSL FNMTRPVIEG
MRARKFGRII NISSINGQKG QFGQVNYSAA KAGDIGFTKA LALENAKGGI TVNAICPGYI
NTEMVQAVPK DVVEKSILPH IPANRLGEPE EIARAVVFLA DDDAGFITGS TLSVNGGQYQ
A