| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3681 |
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| Symbol | |
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| ID | 4033279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4050296 |
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| End bp | 4050919 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972093 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_578869 |
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| Protein GI | 92119140 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.911534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCAG TCATGCAAAA CGTCGTTGCG ATCAACGCGG CCGCCCGCCA AGGCATTATC
GCGGCCCAGG CGACCACAGA CGAGATGCTG CTTGAGCGGA TTGCCGACGG TGACCGCACG
GCGATGCATA CACTCTATTT ACGCCACAAC GTCCGGGTCT ACCGTTTCGT GCTGCGCAGC
CTGCGCGACG CGACCGCGGC GGAAGACATC GTCAGCCAGG TGTTCCTGGA CGTCTGGCGT
ACCGCCGGCC AGTTCGAAGG CCGTTCGCGG GTGTCGACCT GGCTGCTCTC GATCGCCCGC
TTCAAGGCGC TGACCGCGCT ACGTCAGCGC CGCCACGAGG ATATCGACCA GGAGAATGTC
CGCGAAATCG CCGACGGCGC CGACACGCCG GAGACCTCGC TCGATCGCAG CAACGTCAGC
GCCATTCTGC GCGCTTGCAT CGCCAAGCTG TCGCCTGCGC ATCGCGAGAT CATTCACCTC
GTCTACTATC ATGAGAAAAC GGTCGAGGAG GCCGGCGAGA TCATCGGCAT TCCGCAAAGC
ACCGTGAAGA CCCGCATGTT TTATGCCCGC AAGCAGCTCG CCGAGCTTCT GAAAGGTGCG
GGCGTCGCAA CGCTTGCGGC CTAG
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| Protein sequence | MQPVMQNVVA INAAARQGII AAQATTDEML LERIADGDRT AMHTLYLRHN VRVYRFVLRS
LRDATAAEDI VSQVFLDVWR TAGQFEGRSR VSTWLLSIAR FKALTALRQR RHEDIDQENV
REIADGADTP ETSLDRSNVS AILRACIAKL SPAHREIIHL VYYHEKTVEE AGEIIGIPQS
TVKTRMFYAR KQLAELLKGA GVATLAA
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