| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3668 |
|---|
| Symbol | |
|---|
| ID | 4033266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 4040686 |
|---|
| End bp | 4041222 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637972080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_578856 |
|---|
| Protein GI | 92119127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCC GTAATCGAGG CCGCGCAGCG AACGCGCTGA AGCGCCGCGC ATTTGCGGCA
GCCGTGACGG CCGTGATAGC GGCCTCGTCG GCCCGTGCCG GCGACGATGC GCTCGTCACC
TATAAGTCAC TGGCCCCGGA CGTCGCGCTG GAGGCTGCGC AGGCCGCGCT GAAGACATGC
CGCGACACCG GATATCAGGT TGCCGTGGCC GTGGTCGATC GCTTCGGCCA GCCGCAGGTG
CTGCTGCGCG ACCGTTATGC CGGCCTGCCC GCGGCCGACA TCGCCACCGC CAAGGCCTAT
ACGGCGCTGA GTTTTCGCCG CGACACCTCC GAACTGGCGA AAATGGTGCG GAACGGCCAG
ATCGACGCCA GCCTGGCGCG ATTGCCGCGC ATCGCGATGC TGGCCGGCGC GCTGATAATC
GAAACCGGCG GGACGCTTGT GGGCGGCATC GGCGTCTCCG GCGCACCCGG CGGCGACAAG
GACGAGGCCT GCGCCAGAGC GGGTCTGGAC GCGATCCGCG ACAAACTGGA TTTCTGA
|
|---|
| Protein sequence | MCGRNRGRAA NALKRRAFAA AVTAVIAASS ARAGDDALVT YKSLAPDVAL EAAQAALKTC
RDTGYQVAVA VVDRFGQPQV LLRDRYAGLP AADIATAKAY TALSFRRDTS ELAKMVRNGQ
IDASLARLPR IAMLAGALII ETGGTLVGGI GVSGAPGGDK DEACARAGLD AIRDKLDF
|
|---|
| |