| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3646 |
|---|
| Symbol | |
|---|
| ID | 4031370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 4015626 |
|---|
| End bp | 4016489 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637972058 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_578834 |
|---|
| Protein GI | 92119105 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.362219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATCTGC TTGTACAAGT CCTCATCAAC GGCACCCTTT TGGGCGGGCT GTACGCCATG
ATGGCGCTCG GTCTCGCGCT GGTCTGGGGC GTGCTGAATA TCGTCAACCT GGCGCACGGC
GCATTCATCA TGCTCGGCGC CTACGTGTCC TTGTATCTCT TCACGTACCT GCATATCGAC
CCGTTTTTGG GCCTGCCGAT CACCGCGGCG GTGATGTTCG CGATCGGCTA CTGCGTCCAG
CGCGGCCTTT TGAATTTGAT CGTCCGCGCG CCGATGTTCA ACACGTTGCT GATAACGTTC
GGGCTGGAGG TTGTGCTGAC CTATCTTGCG CAGCTCGCAT TCTCGGCCGA CTTTCGCACC
ATCAATCCCT CTTATGCGGG CGACAGCATC GTGCTGGGTC CGGTCGTCTT GCCGCTGGCG
CGGCTTCTGG CCTTCGGCGT GGCCATCGCG CTGACGGTCG GGATGTGGGT GTTCCTGCTG
CATACGACGC TCGGCCGCGC TATCCGCGCC ACGGCGCAAA ATCTGGTGGC GGCCCGCCTC
TACGGCGTCG AGCCTCGGCA TCTCTACGCC GTGACTTTCG GTATCGGAAT TGCGCTGGCC
GGAACGGCCG GAGGGCTCTA CGGGACCGTA TCGCAGATCA ATCCATACAT CGGCGCGGCA
TTGACCGCGA AGTCGTTCGC CATTTCGATC ATCGGAGGAT TGGACAATCC ACTCGGCGTG
ATCGTCGGAG GCCTGTTTCT GGGAATCCTC GAATCGCTGA CAGCTCTTTA TATTGGGCCG
ACCTACGCCG ACGTGGCGAG CTTTGGCGTG CTGGTGCTGG TCCTGATCGT GCGGCCGACC
GGTCTTCTGG GGAAAGCGGC ATGA
|
|---|
| Protein sequence | MDLLVQVLIN GTLLGGLYAM MALGLALVWG VLNIVNLAHG AFIMLGAYVS LYLFTYLHID
PFLGLPITAA VMFAIGYCVQ RGLLNLIVRA PMFNTLLITF GLEVVLTYLA QLAFSADFRT
INPSYAGDSI VLGPVVLPLA RLLAFGVAIA LTVGMWVFLL HTTLGRAIRA TAQNLVAARL
YGVEPRHLYA VTFGIGIALA GTAGGLYGTV SQINPYIGAA LTAKSFAISI IGGLDNPLGV
IVGGLFLGIL ESLTALYIGP TYADVASFGV LVLVLIVRPT GLLGKAA
|
|---|
| |