| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3638 |
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| Symbol | |
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| ID | 4031362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 4003344 |
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| End bp | 4005809 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637972050 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_578826 |
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| Protein GI | 92119097 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCGG CGGATCACGC GAGCGATACG AGAAGCGGCA ACGGAGCGGC AGGACATTCA
TCAGTCATCG GCTGGGGCAA GGCGATGATC GGCGTTGCCG CGGTGATGCT GATCCCCGAT
TCCGCCGACG CCCAGCCGGC GTCCAGCGCT GAAGATCTTC CGCAGGTTCG CGTTACGGCG
CCGAAGCGGC AGGCCAAGAA AAGAACCGTA CACCGTGCGC CGGTACGGGC CGCGCCGGTG
CCGTTTGTTG CCGCGCCGAG CAACGTCCAG GTCAATCCTA TCGTCGGCGA CGGGCATGGG
GTCACCGGCT ATCAGGCCCC GGCGCAGGCC GGGATTTCCC GCCTTCCAAC CTCGCTCGCC
GATACGCCGC AAACCGTCAA CGTGGTGACG CAGCAGGTAC TCCAGGAGCA GCGTCTCCTT
AGCATGGAAG ATGCGCTGCG GACGGTGCCG GGCATCACCT TCAGCGCCGG CGAGGGCGGC
CAGCAGGGCG ACAGCCCGAT CGTCCGCGGT TTTGCGGCGC GGGGCGACAT GTTCCGCGAC
GGCATCCGCG ATCCGGGCTG GTACACGCGT GACCTGTTCA GCGCCGACCG CGTCGAAGTG
TACAAGGGGC CGTCGGGATT TGCCTTCGGC CGCGGTTCGA CCGGCGGCGC GATCAACACC
GTCTCGAAGT TGCCGCAAGC CACCAACTTC GTCGATGGCA CCGTCAGCGG CGTCACCAGT
GGCGGTTATC GCGCCGAGGT CGATGCCGAT GGCAAACAAG GGAATTTGTC CGGCCGCCTC
GCGGCGATGT ATCAGGATAT TCCCACCGCC GGTCGCGATC ACATTTTCGC AAAGCGCTGG
GGCGTCGCTC CGTCGGTCAA GGCGGAGTTC TCGGAGGATA CCCGCGGGAT CTTCAGCTAC
GTCTATCAGG GCGAGGACAG CGTGCCGGAT TACGGGCACC GCTATCTGCC GGCGCCGACC
TACAGCCAAA CGACCGGCGC GCTGGCCACC CCCGGTTACT TCGGCAACGG TGCGGCGACC
CCGCCGATGC CGGTCCCCCG CCATGTCTGG TACGGCGTGG TGGGTGGGCC GCTGGCTGAC
CGCCAACTCA CCGACACCCA CATCGCGACA GCTCGTTTCG AACATGATTT CAACGACAAT
TTGAAGATTT CGAACGGGAC GCGATACGTC AGTGTCAACC GCATGGCGCG GCCGACAGCC
CCGCGCGGCG AATTGCAGGC CGACAACGCC ACGGCCATCA CGCCGGGCTA TCCAGTTGAA
CTGATGACGA TGGGGCGGCA GCACTTCGAG ACGGTGACCA ACAACACGCT GCTCATCAAC
CAGACCGACC TGACCGGCAA GTTCTGGACC GGCGGCTGGG AGCATACGTT CGCGGTGGGC
GCCGAAGCCG CGCGCGAAAC CCGCGATCAG ATACGCGCTA ATTACTGCGT GCCAGGCGAT
CTGGCGTGCC GAACCAGCGC CTTTGCTCCC GTCGATACAT CCTTTGGCGG GCCGAATACC
GGGTTCGGCT TGCCGAATTC GACGGTGTCG ACCAACTACG CGGTCTACGG CTTCGATCAG
GTCAAGCTCA ACAAATACTT CGAGCTACTC GGGTCGATCC GTTACGACAA CTTCCGTTCG
AAATACACCA ATTTCGCGTT GGCGCCCGGA AGCGAGCAGC TTGGCCGGAC CGACGATATG
GTTAGCTGGC GCGTCGGCGG GGTCTTCCAT CCGACGTCGA AATCGAGCCT CTATGCTGCC
TATGGCGTGT CGTACAATCC TGCGGCTGAA TTCCAGACGC TCGACGCCCG CGACAACAAC
GCGGCGAACC CCTTGCTGGC TCCTGAGCGC AACACGACGA TCGAAGTCGG CGCCAAGGCG
GATGTGCTTA ACGGCAAGCT GACGCTGAGC GGCGCGGTGT TCCGGATCGA AAAGACCAAT
CTGCGTATTC CGATCGATCC GATCGCCGGA AACCTCGCGC TGGTGCTTGG CGGCCTTGCG
CGCGTGGACG GTGTCGAGGT GAGTGCCGCA GGCAAGCTCA CCGATCAGTG GGGCCTGTTC
GCGGGCTACA GCTATCTCGA CTCCAAGATC GTCAACACGA CTGATCTTTC GCAGTTGGGC
CGCCAGCTGC CCAACACGCC GCCGCATAAC TTCTCGCTGT GGTCGACCTA CGACTTCACG
CCGCAGTGGA CCGTTGGCGG CGGTGTGACT TATGCAGCAC GTACTTTCGT CAATCCGACG
AACACCTCTT ATGTGCCGGA ATACTGGAAG CTCGATCTCA TGACGAGCTA CAAGGTCACC
AGGGATTCGC TGCTGCAGCT CAACGTCTAC AACGTGACGG ACGAGCTGTA CTACGGCCAA
TACTACCAGG GCCACGCCGT TCCGGCTGCC GGACGAACCG CGATGCTGAC CTACCGCTAT
CACTTTACGC CGCCGCCGCC GGTCGCCGAT TATCCGGTGA AGGCTGCGCG CTACGTGAGC
AAGTAA
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| Protein sequence | MLSADHASDT RSGNGAAGHS SVIGWGKAMI GVAAVMLIPD SADAQPASSA EDLPQVRVTA
PKRQAKKRTV HRAPVRAAPV PFVAAPSNVQ VNPIVGDGHG VTGYQAPAQA GISRLPTSLA
DTPQTVNVVT QQVLQEQRLL SMEDALRTVP GITFSAGEGG QQGDSPIVRG FAARGDMFRD
GIRDPGWYTR DLFSADRVEV YKGPSGFAFG RGSTGGAINT VSKLPQATNF VDGTVSGVTS
GGYRAEVDAD GKQGNLSGRL AAMYQDIPTA GRDHIFAKRW GVAPSVKAEF SEDTRGIFSY
VYQGEDSVPD YGHRYLPAPT YSQTTGALAT PGYFGNGAAT PPMPVPRHVW YGVVGGPLAD
RQLTDTHIAT ARFEHDFNDN LKISNGTRYV SVNRMARPTA PRGELQADNA TAITPGYPVE
LMTMGRQHFE TVTNNTLLIN QTDLTGKFWT GGWEHTFAVG AEAARETRDQ IRANYCVPGD
LACRTSAFAP VDTSFGGPNT GFGLPNSTVS TNYAVYGFDQ VKLNKYFELL GSIRYDNFRS
KYTNFALAPG SEQLGRTDDM VSWRVGGVFH PTSKSSLYAA YGVSYNPAAE FQTLDARDNN
AANPLLAPER NTTIEVGAKA DVLNGKLTLS GAVFRIEKTN LRIPIDPIAG NLALVLGGLA
RVDGVEVSAA GKLTDQWGLF AGYSYLDSKI VNTTDLSQLG RQLPNTPPHN FSLWSTYDFT
PQWTVGGGVT YAARTFVNPT NTSYVPEYWK LDLMTSYKVT RDSLLQLNVY NVTDELYYGQ
YYQGHAVPAA GRTAMLTYRY HFTPPPPVAD YPVKAARYVS K
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