| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3619 |
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| Symbol | sdhB |
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| ID | 4030389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3985715 |
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| End bp | 3986497 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637972031 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_578807 |
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| Protein GI | 92119078 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.485084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAACT TCGCGCTTCC GAGAAATTCA AAGGCCACCG GCGGCAAGAC CTGGCCGAAG
CCTGAAGGCG CGACCGAAAC GCGCGAATTC AGGGTCTATC GCTGGAACCC CGACGACGAC
AAGAATCCCA GCATCGATAC CTATTATGTC GATGTCAACG AGTGCGGCCC GAGGGTGCTC
GACGGCCTGA TCTGGATCAA GGACCACATC GACCCGACGC TGACCTTCCG CCGCTCCTGC
CGCGAAGGCG TGTGCGGCTC CTGCGCCATG AACATCGATG GCCAGAATAC GCTGGCCTGC
ACCACGTCGA TGCACGACTT GGCCGGCGGC GTGGTAAAGA TCAATCCGCT GCCGCATCAG
CCAGTCGTGA AGGACCTCGT TCCCGACCTG ACAAATTTTT ACGCGCAATA CGCCTCGATC
GAGCCGTGGC TGAAGACCAC CACGCCGACG CCGCAGAAGG AATGGTTGCA GAGCCACGAG
GACCGCGAAA AGCTCGACGG CCTCTACGAG TGCATCCTGT GTGCCTGCTG CTCGACAGCA
TGCCCGAGCT ATTGGTGGAA CAGCGATCGC TTCCTCGGCC CCGCCGCGCT GCTGCAGGCG
GCGCGATGGG TCACCGATTC GCGCGACGAA GCCACCGGCG AACGTCTCGA CTATCTCGAG
GATCCGTTCC GGCTCTATCG TTGCCACACC ATCCTGAATT GCACCAAGGC CTGTCCGAAA
AAACTGAACC CGGCGGAGGC TATTGCCATG CTGAAGCGAA AGCTGGTCGA GCGGCAGGTC
TGA
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| Protein sequence | MANFALPRNS KATGGKTWPK PEGATETREF RVYRWNPDDD KNPSIDTYYV DVNECGPRVL
DGLIWIKDHI DPTLTFRRSC REGVCGSCAM NIDGQNTLAC TTSMHDLAGG VVKINPLPHQ
PVVKDLVPDL TNFYAQYASI EPWLKTTTPT PQKEWLQSHE DREKLDGLYE CILCACCSTA
CPSYWWNSDR FLGPAALLQA ARWVTDSRDE ATGERLDYLE DPFRLYRCHT ILNCTKACPK
KLNPAEAIAM LKRKLVERQV
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