| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3606 |
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| Symbol | |
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| ID | 4031539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3965875 |
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| End bp | 3966753 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637972017 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_578794 |
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| Protein GI | 92119065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.222651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCG GGCAGTTTCG CGTTTCGCCC CGCTCGGTCA CGTTGGCCGC CGTCCTCGTC
GGGATGGTGT CGCTGGCGAT CGGAGCCCAT GCCGCGCTCA ACAAGCGCAG CCTGGAAGTC
GCGAAGGCCC TCACTGTAGC CGACACGACC GGCAACATCG CCGTCAAGCC GTCGCGGGTC
GCGCTGGTCA TCGGCAACGC GCATTATCCG GATGCGAACC GGCCGTTGAA GCAGTCCATC
AACGATGCCC GGGCGCTGAC GACGACTCTG CGGCGCGACG GTTTCGACGT CATCATGGTC
GAGGACGCCA ACAAGGACGA TATGCGCCGC GCGGTCCGCC GTCTGGAATC GAAGATCGGT
CCCGATACGA CGGCGCTACT GTTCTTCAGC GGCTTCGGCA TTCAGTCCGG CCGCGAGAGC
TACATGATCC CGGTCGATGC GCGGATATGG AAGGAAGCCG ACGTCCGGCG CGACGGGCTT
TCCATCGAAA CCGTGCTCGG AGCGATGAAA GAGCGCGCCG CCAAGGTCAA GCTGGCGGTG
ATCGATGCAT CGCGGCGCAA CCCGTATGAG CGGCGCTTCC GCTCCTACTC TCATGGCCTT
GCGCCGATCA ATGCGCCGGA CAATGCGCTG ATCCTGTCGT CGGCCACGCC GGGACAGGTC
GTCGATGAGT CCGGCGGGCA ATCCAGCCTG CTGGTGGCGG AATTGCTCAA GAGCCTCGAT
ATGCCGAATG CGGACGCCGA AACCGTGTTC AGCAAGACGC AGGTCGCGGT TTCGCGCGCG
AGCGAAGGTG AGCAGGTCCC GACGGTGTCG TCGTCGCTGG TCCAGGACGT GCCGCTCAGG
TCCGATGCGG CGACGGCCTC GCGCAAGGCC GGCAGCTAA
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| Protein sequence | MTFGQFRVSP RSVTLAAVLV GMVSLAIGAH AALNKRSLEV AKALTVADTT GNIAVKPSRV
ALVIGNAHYP DANRPLKQSI NDARALTTTL RRDGFDVIMV EDANKDDMRR AVRRLESKIG
PDTTALLFFS GFGIQSGRES YMIPVDARIW KEADVRRDGL SIETVLGAMK ERAAKVKLAV
IDASRRNPYE RRFRSYSHGL APINAPDNAL ILSSATPGQV VDESGGQSSL LVAELLKSLD
MPNADAETVF SKTQVAVSRA SEGEQVPTVS SSLVQDVPLR SDAATASRKA GS
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