| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3584 |
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| Symbol | |
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| ID | 4030912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3940177 |
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| End bp | 3941583 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971996 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_578773 |
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| Protein GI | 92119044 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.931395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAC CGACAACCCT GTACGACAAG ATCTGGAACG ATCATCTCGT CCACGAGGCC
GAGGACGGCA CCTGCCTGAT CTACATCGAT CGTCACCTCG TGCATGAAGT GACGTCGCCT
CAAGCGTTCG AGGGCCTGCG CGTAGCCGGC CGCAAGGTTC ATGCGCCGGA GAAAACGCTC
GCGGTGGTCG ATCACAACGT GCCGACGACC GATCGCACCA AGCCCAATCC CGATCCGGAG
AGCGCCGAGC AGATCGCGAC GCTGGCGCAG AATGCCAAGG ATTTCGGCAT CGAATACTAC
AACGAGTTCG ACAAGCGTCA GGGCATCGTC CACGTCATCG GTCCCGAGCA GGGCTTTACC
CTGCCCGGCA CCACCATCGT CTGCGGCGAC AGCCACACCT CGACCCACGG CGCGTTCGGC
GCGCTGGCGC ACGGCATCGG CACCTCCGAG GTCGAGCATG TGCTGGCGAC GCAGACGCTG
ATCCAGAAGA AAGCAAAGAA CATGCGCGCC GTCGTCTACG GCACGCTGCC GGACGGCGTC
ACCGCCAAGG ATATCATCCT CGCCATCATC GGCGAGATCG GCACCGCCGG CGGCACCGGC
TATGTGCTGG AATATGCCGG CGAGGCGATC CGCGCGCTGA CGATGGAAGG CCGCATGACG
GTCTGCAACA TGTCGATCGA GGGCGGCGCA CGCGCCGGCC TGGTCGCGCC GGACGAGAAA
GCCTACGAGT TCCTGAAAGG ACGCCCGAAA GCGCCGAGGG GCGCCGACTG GGACGCGGCG
ATGCGCTACT GGGAGACGCT GCGCAGCGAC GACGGCGCGC ACTTCGATCA CGAGATTCGG
CTCGACGCCG CCAGGCTGCC GCCGATCGTG ACCTGGGGTA CCAGTCCTGA AGACGTCATT
TCGGTGACCG GCAAGGTGCC GAACCCTGCC GACATCGCCG ACGAAGCGAA GCGGCTCTCC
AAGGAGCGCG CGCTGCACTA TATGGGCCTG GCTGCCGGCA CCAGGATTAC CGACATCACG
CTCGACCGCG TCTTCATCGG CTCCTGCACC AACGGCCGCA TCGAGGATCT GCGCGCGGCG
GCGAAGATCG CGGATGGCCG GACGGTGAAC GGCAACGTCA ATGCCATGGT CGTGCCCGGT
TCGGGGCTTG TGAAGGAGCA GGCGGAGGCC GAAGGCCTCG ACAAGATCTT CATCAAGGCC
GGTTTCGAAT GGCGCGAGCC GGGCTGCTCG ATGTGCCTTG CGATGAATCC CGACAAGCTG
AAGCCGGAAG AGCGCTGCGC CTCGACCTCC AACCGCAACT TCGAAGGACG GCAAGGCTTC
AAGGGCCGCA CGCATCTGGT GTCGCCGGCG ATGGCGGCGG CGGCCGCGAT CGCCGGACAT
TTCGTCGACG TGCGCGAGTG GCATTGA
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| Protein sequence | MSKPTTLYDK IWNDHLVHEA EDGTCLIYID RHLVHEVTSP QAFEGLRVAG RKVHAPEKTL
AVVDHNVPTT DRTKPNPDPE SAEQIATLAQ NAKDFGIEYY NEFDKRQGIV HVIGPEQGFT
LPGTTIVCGD SHTSTHGAFG ALAHGIGTSE VEHVLATQTL IQKKAKNMRA VVYGTLPDGV
TAKDIILAII GEIGTAGGTG YVLEYAGEAI RALTMEGRMT VCNMSIEGGA RAGLVAPDEK
AYEFLKGRPK APRGADWDAA MRYWETLRSD DGAHFDHEIR LDAARLPPIV TWGTSPEDVI
SVTGKVPNPA DIADEAKRLS KERALHYMGL AAGTRITDIT LDRVFIGSCT NGRIEDLRAA
AKIADGRTVN GNVNAMVVPG SGLVKEQAEA EGLDKIFIKA GFEWREPGCS MCLAMNPDKL
KPEERCASTS NRNFEGRQGF KGRTHLVSPA MAAAAAIAGH FVDVREWH
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