Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3579 |
Symbol | rpsP |
ID | 4030907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3937487 |
End bp | 3937819 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637971991 |
Product | 30S ribosomal protein S16 |
Protein accession | YP_578768 |
Protein GI | 92119039 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.41568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTCG TGATCCGCCT CGCCCGTGCC GGCACCAAGA AGCGGCCGGT CTATCATGTC GTCGTCGCCG ATTCGCGCTA TCCGCGCGAC GGCCGTTTCA TCGAGCGGCT CGGCTACTTC AACCCGCTGA TGCCGAAGGA CAATGCCGAC CGGCTCAAGA TCGACCTCGA CAAGGTCAAG GCCTGGCTCG CCAAGGGCGC GCAGCCGTCC GACCGCGTGG CGCGTTTCCT CGATGCCGCC GGCGTCAAGA AGCGCACGGC GCGCAACAAC CCGGAGAAGG CCGTGCCGCG CAAGGAGCGC AAGGCGCAGG CCGAAGCCGC CGCGAAGTCC TGA
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Protein sequence | MPVVIRLARA GTKKRPVYHV VVADSRYPRD GRFIERLGYF NPLMPKDNAD RLKIDLDKVK AWLAKGAQPS DRVARFLDAA GVKKRTARNN PEKAVPRKER KAQAEAAAKS
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