| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3572 |
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| Symbol | |
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| ID | 4030900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3928930 |
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| End bp | 3929475 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637971984 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_578761 |
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| Protein GI | 92119032 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCTCA CAGATTCACT ACGCGAGGAT ATCCTGGCAT CAGTACCGAA TCTGCGCGCA
TTCGCGATTT CGCTGAGCGG AAATGGCGAT CGTGCCGACG ACTTGGTGCA GGAAACCCTG
CTCCGCGCGC TCGCCAACAT CGATTCGTTC CAGCCGGGAT CGAACCTTCC GGCGTGGCTG
TTCACGATCC TGCGCAACCT GTTCCGCTCG GACTACCGGA AGCGGCGGCG CGAGGTCGAG
GATTCCGACG GCAACTATGC GAAAACGTTG AAATCGCAGC CGAACCAGAA CGCCCATCTG
GAATTCGAGG AATTCCGCGC GGCGCTCGAC AAGCTGCCGC AGGATCAGCG CGAAGCCTTG
ATCCTCGTGG GCGCTTCGGG TTTCTCCTAC GAGGACGCCG CGAAGATCTG CGGATGCGCC
GTCGGTACCA TCAAGAGCCG CGTCAACCGC GCGCGATCGA AACTGAGTGC CCTGCTTTAC
GTCGAGGGCA CCGAGGATTT TGGCCCGGAC GACACCGTCC GGGCCGTGAT CGGCAGCGGC
CGATAG
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| Protein sequence | MPLTDSLRED ILASVPNLRA FAISLSGNGD RADDLVQETL LRALANIDSF QPGSNLPAWL
FTILRNLFRS DYRKRRREVE DSDGNYAKTL KSQPNQNAHL EFEEFRAALD KLPQDQREAL
ILVGASGFSY EDAAKICGCA VGTIKSRVNR ARSKLSALLY VEGTEDFGPD DTVRAVIGSG
R
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