Gene Nham_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3565 
Symbol 
ID4032602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3923332 
End bp3925515 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content64% 
IMG OID637971977 
Productmalate synthase G 
Protein accessionYP_578754 
Protein GI92119025 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCA TTGACGCCCA CGGACTGAAG ATCGCGCCTG TCCTGTTCGA TTTTATCGCC 
CGGGAGGCCA CGCCCCGGAC CGGCATTGCC CCGGATGCCT TTTGGGCCGG GCTTGCCGCC
ATCGTCCGCG ATCTCGGACC GAGAAACCGC GAATTGCTCG CGGTGCGCGA TACGCTGCAA
GCGCAGATCG ACGGCTGGCA TCGCGCCAAC AAAAGCCGGC CGTTCGACAT GGCCGCCTAC
ACGGCGTTCC TGAAAGAGAT CGGCTATCTG CTGCCAGAGC CCGCGACCCA TGCGGTCGAG
ACCGCCAATA TCGACGACGA GATCGGAAAA ATCTGCGGAC CGCAACTGGT GGTGCCGCTG
ACCAATGCCC GTTACGCGCT GAATGCCGCC AATGCGCGCT GGGGCAGCCT CTACGATGCG
TTATACGGCA CCGATGCCAT TGCGCACGAG GCCAACGAGG CCAGGGGCTA TGACAAGGCG
CGCGGCGACA AGGTGATCGC CAAAGCCAAG GCGTTCCTCG ATTCCGCCGC ACCGCTTTCG
GCCGGCAGCC ATGCCGATGT CGCCGGCTAC AGCGTCGTCA ATGGACACCT GTCGGCGAAA
CTCAGGAGCG GCGACGCCAC CGGCCTGAAG ACGATTGCGC AATTCGCGGG CTATCAGGGC
GCCGCGGACG CACCGTCCGC GATCCTGCTG GTCAACCACG GCCTGCATAT CGACATCCGG
ATCGACCGCG CCGACCGCAT CGGCAAGGAC GATCCGGCCG GCGTCGCCGA TGTGATCATC
GAGGCCGCCA TCAGCACCAT TCTCGATATG GAGGACAGCG TCGCCGCCGT CGATGCCGAC
GACAAGGTGC TGGTGTATCG CAATACGCTC GGCCTGATGA ACGGCACGCT CACGGACACC
TTCGAGAAGG GCGGCAAGAC CGTCACCCGC GCCCTCAACG CCGATCGCAT CTACACGTCA
GCCAATGGCA AGGAGATCGC CCTCCACGGA CGCAGCCTGC TTTTGATGCG CAACGTCGGC
CATCACATGG TTACCGACGC GGTACTGGAT GAAAACGGCG CAGAGATTCC GGAAGGTATG
CTCGACGCCG CGGTATCAAG CCTGCTCGCG ATCCACGATC TCATGGGGAT TTCGAAGACG
CGGAACAGCC GGACAGGCTC GGTCTACATC GTCAAGCCGA AGATGCACGG CCCCGACGAG
GTGGCGCTGA CCTGCGAACT GTTCGCCCGC GTCGAGACCA TGCTCGGACT GCCGGAGAAC
ACCCTCAAGA TCGGCATCAT GGACGAGGAG CGCCGCACCA CCGTCAACCT CAAGACCTGC
ATCCAGAACG CCTCGAAACG AGTCTGCTTC ATCAACACCG GCTTCCTCGA CCGCACCGGC
GACGAAATCC ATACCTCGAT GGAAGCGGGT CCGATGATCC GCAAGAACGA GATGAAGGCG
CAGCCGTGGA TGAGGGCCTA CGAGGACTGG AATGTCGACA TCGGCCTGAT CGACGGCCTG
CCCGGCCACG CCCAGATCGG CAAGGGCATG TGGGCCGCGC CCGACCGGAT GGCCGACATG
CTCGCGCAGA AGGTCGACCA CCCGCAAGCC GGCGCCACCA CCGCATGGGT GCCCTCGCCG
ACCGCGGCAA CGCTGCACGC CCTGCACTAT CATCAGGTCG ACGTGCTGAA GCAGCAACAG
GAATTGAAAG CCGGCGGACA GCGCGCAAAG CTGTCGGACA TCCTCACGGT CCCGGTGTCG
CAATCGAACT GGGCGCCGGA CGATGTGAGG CTGGAGATCG ACAACAACTG CCAGGGCATT
CTCGGCTACG TGGTGCGCTG GATCGATCAG GGCGTCGGCT GCTCGAAGGT GCCCGATATC
CACGACGTCG GCCTGATGGA AGACCGCGCC ACGCTGCGCA TCTCCAGCCA GCATCTGGCG
AACTGGCTAC ATCAGAACGT CGTCACCAGC GATCAGGTGA TGGACTCGCT GAAGCGCATG
GCCGTCGTCG TTGACAAGCA GAACGCCGGC GATCCCCTCT ACACGCCGAT GGCGCCGACA
TTCGACGGCG TCGCCTTCAA GGCGGCCTGC GATCTCGTGT TCAAGGGCCG CGAGCAGCCG
AACGGCTATA CCGAATACAT CCTGACCGAA CGGCGGCGCC AGGCCAAGGC GGAGTCCAAG
GGGGAGTCCG AGGCGGCCGG CTGA
 
Protein sequence
MTRIDAHGLK IAPVLFDFIA REATPRTGIA PDAFWAGLAA IVRDLGPRNR ELLAVRDTLQ 
AQIDGWHRAN KSRPFDMAAY TAFLKEIGYL LPEPATHAVE TANIDDEIGK ICGPQLVVPL
TNARYALNAA NARWGSLYDA LYGTDAIAHE ANEARGYDKA RGDKVIAKAK AFLDSAAPLS
AGSHADVAGY SVVNGHLSAK LRSGDATGLK TIAQFAGYQG AADAPSAILL VNHGLHIDIR
IDRADRIGKD DPAGVADVII EAAISTILDM EDSVAAVDAD DKVLVYRNTL GLMNGTLTDT
FEKGGKTVTR ALNADRIYTS ANGKEIALHG RSLLLMRNVG HHMVTDAVLD ENGAEIPEGM
LDAAVSSLLA IHDLMGISKT RNSRTGSVYI VKPKMHGPDE VALTCELFAR VETMLGLPEN
TLKIGIMDEE RRTTVNLKTC IQNASKRVCF INTGFLDRTG DEIHTSMEAG PMIRKNEMKA
QPWMRAYEDW NVDIGLIDGL PGHAQIGKGM WAAPDRMADM LAQKVDHPQA GATTAWVPSP
TAATLHALHY HQVDVLKQQQ ELKAGGQRAK LSDILTVPVS QSNWAPDDVR LEIDNNCQGI
LGYVVRWIDQ GVGCSKVPDI HDVGLMEDRA TLRISSQHLA NWLHQNVVTS DQVMDSLKRM
AVVVDKQNAG DPLYTPMAPT FDGVAFKAAC DLVFKGREQP NGYTEYILTE RRRQAKAESK
GESEAAG