| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3562 |
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| Symbol | |
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| ID | 4032599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3918680 |
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| End bp | 3920116 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637971974 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_578751 |
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| Protein GI | 92119022 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCC TCCCGATCTT TCTTGATTCC AAAGCCGGTC CGATCCTTCT GATCGGAGCG
GGCGATCCGG TGCGGGCCAG GCTGCGCCTT TTGCTCGCCG CGGGCGCGCG CGTGCGCTGG
CATGCAACCG ACGGCGACTT CGCGGTCGCC GGTCTCGATG CCGTCGCCGC CTCGCGCATC
GAGCGTCTGG AAACCAATCC CGGCGCGGCC GACCTCGGCG CTATCGTCGC GGTGTTTTGC
GCCGGCGCCG GCGAGATCGG CGTGACTGTA GCGGCGCGCG CGCGGGCGTC CGGTCTGCCC
GTCAACGTGA TGGACGACCC CGCGCATTCG AGTTTCATCG TCCCGGCGAT CGTTGATCGC
GGCGACGTGG TGGTGGCGGT CGGCACCGGC GGTGCGTCGC CCGTGGTGGC GCGGCGCGTG
CGCGAACGCA TCGAGGCGCT GTTGCCGGCG CGAATCGGCG ACCTCGCGGC GTTGATCGGG
CGCTGGCGCA AGGCGGTACA TGCGCGCATT CCCGACATGC CGCTGCGCCG CCGCTTCTGG
GAGCGTGTGG TGGACGGCCC GATCGGCGCG TCTGTTCTCG CCGGCCGCTC CGATGAAGCC
GAAGACTCGC TGCAAGCAAT CGCCGATCCC TCCGCCTACG CGGGCGCATC CGCTCCCGGC
ACTGTCGAAG GCCGCGTCAC GCTGGTCGGC GCCGGGCCGG GCGATCCGGA TCTGCTCACC
ATCAAGGCGC TGCGCGCGTT GCAGGACGCC GACATCGTGT TCTACGACGA GCTGGTCTCG
CCGGAGATTC TCGATCGCGC CCGCCGCGAC GCGGTGCGGA TCCCGGTGGG TCGCCGCGTC
GGCAAGCCCG GCATCGGACA GGATGCCATC AACCGGTTGC TGATCGATGC CGCGAAGTCC
GGACAGCGTG CCGTCCGCCT CAAGGGCGGC GATCCCTTCA TTTTCGGCCG CGGCGGCGAA
GAGATCGAGG CGCTGCGCGA GGCCGGCGTC GCCTGTTCGG TCATTCCCGG AATCACGGCC
GGGCTCGGCG CGGCTGCGGA ATCCGAATTG CCGCTGACCT TCCGCCACGA GGCGCTGCGC
GTCACCTTCC TCACCGCGCA CAAGGCGCGG GATGCTTCGA GCGTCGACTG GTCGGCGCTG
ACCGACCGCA AGATGACGGT GGTCGTCTAC ATGGGAACCA CGGCGGCCAA CGCGATTCGT
GATGGCCTGC TGGCGGCCGG GCGTTCGCCG GAAACCCCGG TCGGCGTGTT CGCGCGCGCC
ACCCGTCCCG ATGCCAAATC CGTCGTCGGC ACGCTGGATC ATCTGCCGGC GCTGGTTCGT
GAAATTGACG GCGGACCCGC CATCCTCGTG ATCGGCGACG TCGTCTCGCA CTCCGCGCCA
TGGCGCAACG CGAGCCCGAC TCCCCTGTTT CATACATTTC AGATGGCCGC CGAATGA
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| Protein sequence | MKFLPIFLDS KAGPILLIGA GDPVRARLRL LLAAGARVRW HATDGDFAVA GLDAVAASRI
ERLETNPGAA DLGAIVAVFC AGAGEIGVTV AARARASGLP VNVMDDPAHS SFIVPAIVDR
GDVVVAVGTG GASPVVARRV RERIEALLPA RIGDLAALIG RWRKAVHARI PDMPLRRRFW
ERVVDGPIGA SVLAGRSDEA EDSLQAIADP SAYAGASAPG TVEGRVTLVG AGPGDPDLLT
IKALRALQDA DIVFYDELVS PEILDRARRD AVRIPVGRRV GKPGIGQDAI NRLLIDAAKS
GQRAVRLKGG DPFIFGRGGE EIEALREAGV ACSVIPGITA GLGAAAESEL PLTFRHEALR
VTFLTAHKAR DASSVDWSAL TDRKMTVVVY MGTTAANAIR DGLLAAGRSP ETPVGVFARA
TRPDAKSVVG TLDHLPALVR EIDGGPAILV IGDVVSHSAP WRNASPTPLF HTFQMAAE
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