Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3560 |
Symbol | |
ID | 4032597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3916805 |
End bp | 3917794 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637971972 |
Product | thiosulphate-binding protein |
Protein accession | YP_578749 |
Protein GI | 92119020 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGTC GTGTTTTCGT TGTTCTTGCC GGATTGATCT GGGCAGGTTC GGCGTATGCT GCCGACGTGT CGCTATTGAA TGTCTCATAC GATCCGACGC GCGAGCTCTA CGTCGATTTC AACAAGGCAT TCGCCGCGGC TTACCAGAAA GAAACCGGCA AGAGCGTCGA GATCAAGCAG TCCCACGGCG GGTCCGGAAA GCAGGCGCGT TCGGTGATCG ACGGTTTGCA GGCCGACGTG GTTACCCTCG CGCTCGCCTA TGATATCGAT GCGATTGCCG AGCGGGGGCT GCTCGCCAAG GACTGGCAGA AGCGGTTGCC GCGAAATTCC TCGCCCTATA CGTCCACCAT CGTTTTCCTT GTGCGCAAGG GCAATCCCAA GGGTATCAAG GACTGGGACG ATCTGATCAA ACCCGGCGTC CGCGTCATCA CGCCCAATCC CAAGACCTCG GGCGGCGCGC GCTGGAACTA TCTCGCGGCA TGGGGTTTCG CGCTGAAGAA GTTCGGCAGC GAGGACAAGG CGAAACAGTT TGTGGCCGAC ATCTACACCC ACGTCCCGGT GCTCGATACC GGCGCGCGTG GTTCCACTGT CACCTTCGTC GAGCGCGGCG TTGGCGACGT GTTGCTCGCC TGGGAGAACG AGGCCTTTCT GGCGCTCAAG GAGTTCGGAA AGGACAAATT CGAGATCGTG GTGCCTTCGA TCTCCATTCT GGCGGAACCG CCGGTCGCCG TCGTCGACAA AGTAGTGGAC AGGAAGGGAA CGCGCGCTGT TGCCGAGGCG TATCTGAAAT ATTGGTATAC TCGGGAAGGG CAGGAGATCG CCGCGCGAAA CTACTACCGT CCGACCGATC CGGAAGTGAT CAAGGAGTAT GCCGATGCAT TTCCCAAGGT CGAGCTGTTC AGGATCGACG ACGTGTTCGG CGGTTGGACC AAGGCGCAGA AGGTCCACTT CGGCGAAGGC GGCATCTTCG ATCAGATCTA CCAGAACTGA
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Protein sequence | MLRRVFVVLA GLIWAGSAYA ADVSLLNVSY DPTRELYVDF NKAFAAAYQK ETGKSVEIKQ SHGGSGKQAR SVIDGLQADV VTLALAYDID AIAERGLLAK DWQKRLPRNS SPYTSTIVFL VRKGNPKGIK DWDDLIKPGV RVITPNPKTS GGARWNYLAA WGFALKKFGS EDKAKQFVAD IYTHVPVLDT GARGSTVTFV ERGVGDVLLA WENEAFLALK EFGKDKFEIV VPSISILAEP PVAVVDKVVD RKGTRAVAEA YLKYWYTREG QEIAARNYYR PTDPEVIKEY ADAFPKVELF RIDDVFGGWT KAQKVHFGEG GIFDQIYQN
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