Gene Nham_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3558 
Symbol 
ID4032595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3915063 
End bp3915941 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID637971970 
ProductSulfate ABC transporter, permease protein CysW 
Protein accessionYP_578747 
Protein GI92119018 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCCGA TGTCCGAAAC CGCGATCGCG ATTCCGCTTG ACCGTACCGA CGCCCGCTCC 
GAACCGCGCT GGGTGCGCGG TCTGCTGATC GGCCTCACCG TCCTGTTTCT CGCGGTGTTT
ATCGTGTTGC CACTGGCGAT CGTGTTTGCG GAAGCATTCG CCAGAGGGGC GCACGCCTAT
CTCGCCGCGC TTGCCGATCC CGAAGCGCAG TCGGCGATCA TGCTGACGCT GGCGGTCGCC
GCGATTTCGG TTGGTCTCAA TCTGTTTTTC GGGCTGATCG CCGCCTGGGC GATCGCAAAA
TTCGAGTTTC GCGGAAAGAC GCTCCTGATC TCGCTGGTCG ATCTGCCGTT CTCGGTGAGC
CCGGTCATTT CCGGTCTGGT GTTCGTGCTG TTGTTCGGCG CGCAGGGTTA TGTCGGACCC
TGGTTGCAGG ACCACAACAT CCAGCTTCTG TTTGCGTTGC CGGGCATCGC GCTGGCAACG
ACCTTCGTGA CCTTTCCATT CGTGTCGCGC GCGCTGATTC CGCTGATGCA GGAGCAGGGG
ACGGCGGAAG AGGAAGCGGC CCTGTCGCTT GGCGCTTCGG GGTTGCAGAC ATTCTTCCGC
GTCACGCTGC CGAACATCAA GTGGGGGTTG CTGTATGGCG TGCTGCTTTG CAATGCCCGC
GCCATGGGCG AATTCGGGGC GGTATCCGTC GTCTCCGGTC ACATCCGCGG CGAGACCAAC
ACCATGCCGC TGCTGGTCGA AATCCTCTAC AACGAATATC AGTTCGTATC GGCGTTCGCG
ATCGCTTCGC TGCTGGCCAT GCTGGCGCTG GTCACCCTGG TGGCGAAGAC CGTTCTGGAA
CGAAATCTCG ACGAAGGACA ACGACCGAGT GACCATTGA
 
Protein sequence
MTPMSETAIA IPLDRTDARS EPRWVRGLLI GLTVLFLAVF IVLPLAIVFA EAFARGAHAY 
LAALADPEAQ SAIMLTLAVA AISVGLNLFF GLIAAWAIAK FEFRGKTLLI SLVDLPFSVS
PVISGLVFVL LFGAQGYVGP WLQDHNIQLL FALPGIALAT TFVTFPFVSR ALIPLMQEQG
TAEEEAALSL GASGLQTFFR VTLPNIKWGL LYGVLLCNAR AMGEFGAVSV VSGHIRGETN
TMPLLVEILY NEYQFVSAFA IASLLAMLAL VTLVAKTVLE RNLDEGQRPS DH