Gene Nham_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3557 
Symbol 
ID4032594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3914024 
End bp3915073 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID637971969 
Productsulphate transport system permease protein 1 
Protein accessionYP_578746 
Protein GI92119017 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID[TIGR00968] sulfate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATTG AAGTCCGCAA TATCGTGAAA AAGTTCGGGG CCTTCGCCGC GCTGGACCAT 
GTCGATCTCA AGGTCCCGCA CGGCGAACTG ATGGCGCTGC TCGGGCCGTC GGGGTCCGGC
AAGACCACGC TGCTGCGCAT TATTGCCGGG CTCGACTGGC CTGATTCCGG AGATGTCTCG
TTCGACGGCG AGAATGCGCT GGCGCGCGGC GCAGGCGAGC GGAGCGTCGG GTTCGTCTTC
CAGCATTATG CACTGTTCCG CCACATGACG GTGTTCGAGA ACGTCGCATT CGGTTTGCGG
GTCCAGCCCC GCGCCGTTCG CAAGGATGAA GTGGGCATCC GCGCGCGCGT CAAGGAGCTG
CTCGACCTCG TCCAGCTCGA CTGGCTGTCC GGCCGTTACC CCGGCCAGCT CTCGGGTGGC
CAGCGCCAGC GCGTCGCGCT GGCGCGCGCG CTTGCGATCG AGCCGCGCGT TCTGTTGCTC
GACGAGCCGT TCGGCGCGCT CGACGCCAAG GTGCGCAAGG AGTTGCGGAC GTGGCTGCGC
TCGCTGCACG AGGAAATCAA CGTCACCTCC ATCTTCGTGA CCCACGATCA GGAGGAGGCG
CTCGAAGTCG CCAACAGCGT GGTGGTGATG GACAAGGGGC GCATCGAGCA GATCGGAACG
CCGAGCGATG TCTATGACAA TCCGCAGACG GCGTTCGTGC ACGGCTTCAT CGGCGAGTCG
ATCGTTCTGC CGGTCGACGT TGATGACGGC TTTGTCCGGC TCGGCGACAC GCCGCTGAAT
ATCGCCGCGG AGCACGGCAG TTCGGGGCCG TCGAAACTGT TCGTTCGCCG CCACGACATG
CAGATCAGTC CGCCCGGTTG GGGCGGCCTC GAAGGGACCG TGCGGCGGGT GCGGACCTTC
GGTCCGATCC AGCGGGCCGA TATCGCGTTG TCCGGCAGGG CGGGCGAAAC CATCATTGAA
ATCGACGCGC CGCGCGACCG CGAGCTTCGC GATGGCGAGG TCGTCGGCCT GCAGCCCCGG
CGCTACCGCA TTTTCGCGGA CCCGACGTGA
 
Protein sequence
MTIEVRNIVK KFGAFAALDH VDLKVPHGEL MALLGPSGSG KTTLLRIIAG LDWPDSGDVS 
FDGENALARG AGERSVGFVF QHYALFRHMT VFENVAFGLR VQPRAVRKDE VGIRARVKEL
LDLVQLDWLS GRYPGQLSGG QRQRVALARA LAIEPRVLLL DEPFGALDAK VRKELRTWLR
SLHEEINVTS IFVTHDQEEA LEVANSVVVM DKGRIEQIGT PSDVYDNPQT AFVHGFIGES
IVLPVDVDDG FVRLGDTPLN IAAEHGSSGP SKLFVRRHDM QISPPGWGGL EGTVRRVRTF
GPIQRADIAL SGRAGETIIE IDAPRDRELR DGEVVGLQPR RYRIFADPT