| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3555 |
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| Symbol | |
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| ID | 4032592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3912208 |
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| End bp | 3913362 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971967 |
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| Product | patatin |
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| Protein accession | YP_578744 |
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| Protein GI | 92119015 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCA TATCTCCCGA ACCGGCTTCA TCGGCAATAC CGGCGCGGGC GCGGTGCGTG
CTGGTGCTTC AGGGCGGCGG CGCGCTCGGC TCCTATCAGG CCGGCGCCTA TCAGGCGCTG
GGCCGGCACG ATTTCGAGCC GGAGTGGGTC GCCGGCATCT CGATCGGCGC GATCAACGCT
GCGATCATCG CGGGCAACCC GCGCGACAAG CGCGTCGAGC GCCTCAGGGA ATTCTGGGAG
TTGGCATCAT CGCCGGTCCC CTGGCAGCCG ATGCTGCCGG ATAACCGCGC GCATTCGCTG
TTCAGCGAGA CCAGCGCGGC CATGATCGCG GCGTTCGGCG TGCCCGGCTT TTTCACGCCG
CGCTTTCCGC CGGCGCAGTT CTGGCCGTCG GCCGACCCAC AATCCCTGAG CTATTACGAC
ACCGCGCCAC TGCGCGCGAC GCTCGAGCGG CTGGTGGATT TCGACCGCAT CAATAGCGGG
GCGACGCGGC TCAGCGTCGG CGCGGTGAAT ATCGCGACCG GCAACTTCAC CTATTTCGAC
AACACCCGGC AGAAGATCGG TCCGGAGCAC ATCCTGGCAT CCGGCGCGCT GCCGCCCGGT
TTCCCGGCAA TCGAGATCGG CGGCGAATAC TACTGGGACG GCGGCATCGC CTCGAACACG
CCGCTGGATT ACGTGCTGGA TCAGAAGACC GCGTCCGATC TTTTGATCTT TCAGGTCGAT
CTGTTCAGCG CGCGCGGGCC GTTGCCGACC ACGCTGCTGG AGGCCGCCGA TCGCGAAAAG
AACATCCGCT ACTCCAGCCG GACCCGGATG AACACCGACA AGAACAAGCA GATTCACAAC
GCGCGCAAGG CGGTGCGCGA CCTGATTTCG AAACTGCCGG CCGATCTCAA GGATGATCCT
TCGGTCAAGT TCCTCAAGCA GGCGGCCAAG GAAAACACCG TCACGGTGGT TCACCTGATC
TATCGCCGCA AAAATTACGA GGCCTCGCTG AAGGATTACG ATTTTTCGCG TCTCAACATG
ACCGAGCACT GGTCCTCCGG CGAACATGAC GTCGATCTCT CGATGCGTCA TCCGGAGTGG
CTGGCGCGGC GGCAGGGTGG CGAGGCCATG GTGACTTACG ACCTCACCGC CGAGGATGAA
AAGGGTGCTC CGTAA
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| Protein sequence | MDSISPEPAS SAIPARARCV LVLQGGGALG SYQAGAYQAL GRHDFEPEWV AGISIGAINA
AIIAGNPRDK RVERLREFWE LASSPVPWQP MLPDNRAHSL FSETSAAMIA AFGVPGFFTP
RFPPAQFWPS ADPQSLSYYD TAPLRATLER LVDFDRINSG ATRLSVGAVN IATGNFTYFD
NTRQKIGPEH ILASGALPPG FPAIEIGGEY YWDGGIASNT PLDYVLDQKT ASDLLIFQVD
LFSARGPLPT TLLEAADREK NIRYSSRTRM NTDKNKQIHN ARKAVRDLIS KLPADLKDDP
SVKFLKQAAK ENTVTVVHLI YRRKNYEASL KDYDFSRLNM TEHWSSGEHD VDLSMRHPEW
LARRQGGEAM VTYDLTAEDE KGAP
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