Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3554 |
Symbol | |
ID | 4032591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3911386 |
End bp | 3912174 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637971966 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_578743 |
Protein GI | 92119014 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACC TGAAAGGCAA GACCGCGGTA GTGACCGGCT CGACCAGCGG CATCGGCCTC GCCTATGCCC GCGCCTTTGC GAGTGCCGGC GCCAATATCG TGATCAACGG GTTCGGCGCG CCGGCCGACA TCGAGAAGGA ACGCTCCGCC ATCGAGGCCG AGTTCAAGGT CAGGGCGGTC CATTCGCCCG CCGACATGAC AAAACCCGCC GAGATCGCCG GCATGATTGC GCTGGGCGAA ACGACCTTCG GCTCGGTCGA TATTCTCGTC AACAATGCGG GTATCCAGTT CGTCGCGCCG GTCGAGGAGT TTCCCATCGA GAAGTGGGAC GCGATCATCG CTATCAACCT GTCGTCGGCG TTCCACGCCA TCCGCGCCGC TGTCCCCGGC ATGAAGACGC GCGGCTGGGG CCGCATCATC AACACCGCCT CGGCGCATTC GCTGGTGGCC TCGCCCTTCA AGTCGGCCTA CGTCTCCGCC AAGCACGGCA TCGCCGGCCT CACCAAGACG GTGGCGCTGG AGCTTGCGGC CCACAAGATC ACCTGCAACT GCATCAGCCC CGGCTATGTC TGGACGCCGC TGGTCGAGAA GCAGATCCCC GACACCATGA AGGCGCGCGA CATGACCAAG GAGCAGGTCA TCAACGACGT GCTGCTTGCG GCGCAGCCGA CCAAGCAGTT CGTCACCGTG GAGCAGGTCG CCGCCCTGGC GCTCTTTCTG TGCGGCGACG ATGCCAGCCA GATCACCGGA AGCAACCTGT CGATCGACGG CGGCTGGACG GCGGAGTAG
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Protein sequence | MTNLKGKTAV VTGSTSGIGL AYARAFASAG ANIVINGFGA PADIEKERSA IEAEFKVRAV HSPADMTKPA EIAGMIALGE TTFGSVDILV NNAGIQFVAP VEEFPIEKWD AIIAINLSSA FHAIRAAVPG MKTRGWGRII NTASAHSLVA SPFKSAYVSA KHGIAGLTKT VALELAAHKI TCNCISPGYV WTPLVEKQIP DTMKARDMTK EQVINDVLLA AQPTKQFVTV EQVAALALFL CGDDASQITG SNLSIDGGWT AE
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