| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3553 |
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| Symbol | |
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| ID | 4032590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3909882 |
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| End bp | 3911258 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971965 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_578742 |
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| Protein GI | 92119013 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGTAA CGGACACCCC AACCGCACCT GCAAGGCGAT TGTCCGGCCT GATCGGGCGG
TTGCGTGCGA CGCTGGCCGG TTCAAACGAG GCTTCGCTGA CCAACCGCCT CGCCGGCACG
ATCTTCATCA TTCGTGTCAT CAGCGCCGGC CTCGCCTATG TCGCACAGAT CCTGCTCGCG
CGCTGGATGG GCGGCTCCGA CTACGGCGTT TATGTCTATG TCTGGACCTG GGTACTGCTG
CTCGGCAGCA TGATGGATTT CGGCATCTCG GCCTCGGCGC AGAAGATCAT TCCGGAATAT
CGCGCCAGCG GCGACGACGC ACGGCTGCGC GGATTCCTGA GCGGCAGCCG CTGGATGACG
TTCATCGTCG CTGCATTGAT TTCGATTTTG CTCGCGGCCC TCGTCAGGGT GCTGTCGCCG
TGGATCGATC CGGCGACGGT CCTGCCGCTC TATATCGGCT GTCTGACGCT GCCGGCCTTC
GTGGTCGCCA ATACCCAGGA CGGCATTGCG CGCTCCCACG ACTGGATGCG GCTCGGGCTG
ATGCCGCAAT TCATCGTGCG GCAGTCGCTG ATCATCGGCT TCACCGCCGG CGCTTTCGTC
CTGGGATTTC ATCTCAGCGC CGCCATCGCC ATGCTGGCAA GCGTGGCGGC GGTGTGGATC
GCCATGATCG GACAGATGAT CGTGCTCAAC CGGAAGCTCG GCACCAGCGT CGCCGCCGGG
CCGAAGGTCC ACGATTTCCG CGCCTGGCTC GCGGTCTCGC TGCCGATCCT GCTGGTCGAA
AGCTTTTATC TATTGTTGTC CTACACCGAT GTGCTGGTGT TGCAGCAGTT CCGCCCCTCG
GACGAGGTCG GCGTTTACTT CGCGGTCGTC AAGACGCTGG CGCTGGTGTC GTTCATTCAC
TACGCGATGT CGGCGACGAC GGCGCACCGC TTCACCGAAT ATCACGCGGC CGGCGACAAG
GAACGGCTGG CGGCCTACGT CGCACATGCG ATCAAGTGGA CGTTCTGGCC GTCGCTCGCC
GCGACGCTGC TGCTGCTCGC GCTCGGCAAG CCGATGCTGT GGCTGTTCGG CCCGCAATTC
GTCACCGGCT ACAGCATCAT GTTCATTGCC GCGATCGGGC TCGTGGTCCG CTCCGCGATC
GGCCCGGTCG AGCGGCTGCT CAACATGCTC GGCCATCAGC ACGCCTGCGC GGCGGCCTAT
GCGCTGGCCT TCGGCATGAA CGTCGCGCTG TGCTTCGCGT TTGTCCCGCG CTACGGCGGC
CACGGCGCCG CCGCCGCCAC GTCGATATCG CTAGCGTTCG AGACGGTGCT GCTGTTCTGG
ATCGTGCGCC GCAAGCTCGG ACTGCATGTG CTGGCGTTCG GGAAGAAGCG TGCTTAA
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| Protein sequence | MAVTDTPTAP ARRLSGLIGR LRATLAGSNE ASLTNRLAGT IFIIRVISAG LAYVAQILLA
RWMGGSDYGV YVYVWTWVLL LGSMMDFGIS ASAQKIIPEY RASGDDARLR GFLSGSRWMT
FIVAALISIL LAALVRVLSP WIDPATVLPL YIGCLTLPAF VVANTQDGIA RSHDWMRLGL
MPQFIVRQSL IIGFTAGAFV LGFHLSAAIA MLASVAAVWI AMIGQMIVLN RKLGTSVAAG
PKVHDFRAWL AVSLPILLVE SFYLLLSYTD VLVLQQFRPS DEVGVYFAVV KTLALVSFIH
YAMSATTAHR FTEYHAAGDK ERLAAYVAHA IKWTFWPSLA ATLLLLALGK PMLWLFGPQF
VTGYSIMFIA AIGLVVRSAI GPVERLLNML GHQHACAAAY ALAFGMNVAL CFAFVPRYGG
HGAAAATSIS LAFETVLLFW IVRRKLGLHV LAFGKKRA
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