Gene Nham_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3550 
Symbol 
ID4030533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3906636 
End bp3907286 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID637971962 
Producthypothetical protein 
Protein accessionYP_578739 
Protein GI92119010 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.749853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG CGCGAAAAAG GCCCGGCACG GGCCGTCGCC AGACTGACGA CGCAGACACC 
GGCGCTCCGG ACCAGAGCTA TCTGGACGGC CAGTTGCTGA TCGCGATGCC GGTCATGGAA 
GATGAGCGGT TCGCGCGCTC CGTGATCTAT GTTTGCGCGC ACTCGTCCGA GGGAGCGATG 
GGTATCATCC TCAATCGCCC CGCCGGAAGC GTCGATTTCG CCGATCTGCT GGTCCAGCTC 
GACATCATCA AGAGATCCGA CAGCATCAAG CTACCGGAAA CCGCCGAGGC GATGAAAGTG 
ATGAAGGGCG GCCCGGTCGA AACCGGCCGC GGATTCGTCC TGCACTCGAG CGATTTCTTC 
ATCGAGGATG CGACGCTGCC GATCGACGAT GGCGTCTGCC TGACCGCGAC GCTCGATATT 
CTGGAAGCCA TTGCGAAAGG CGCCGGCCCG AAACATGCGA TCCTGGCGCT CGGTTATGCC 
GGATGGGCGC CGGGCCAGCT CGAGACGGAA ATCCAGGACA ATGGATGGCT GCATTGTCCG 
GCCGATCCGG AGCTGATCTT CGGCCGTGAC ATCGAGGACA AATATACCCG CGCGCTGCAC 
AAGATCGGCA TTGATCCCGG CATGTTGTCG AACGAAGCCG GCCACGCCTG A
 
Protein sequence
MSAARKRPGT GRRQTDDADT GAPDQSYLDG QLLIAMPVME DERFARSVIY VCAHSSEGAM 
GIILNRPAGS VDFADLLVQL DIIKRSDSIK LPETAEAMKV MKGGPVETGR GFVLHSSDFF 
IEDATLPIDD GVCLTATLDI LEAIAKGAGP KHAILALGYA GWAPGQLETE IQDNGWLHCP 
ADPELIFGRD IEDKYTRALH KIGIDPGMLS NEAGHA