Gene Nham_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3546 
Symbol 
ID4030529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3901012 
End bp3901533 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID637971958 
Producthypothetical protein 
Protein accessionYP_578735 
Protein GI92119006 
COG category[S] Function unknown 
COG ID[COG5317] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC CATCGGCAGG CGACACCGGT CTTGTCCAGT TTAGCGAGCG CCTCGCCGGC 
TCTTCCGCGT TCACCGCCCT GTTCCGGGAA GGCATGGATC TGGTCGAGGC AACCGCCGCC
TATCTCGACG GTGACGGCCG CACCGACGCC AGGACCCTCG AACGGTCCGT CAGCCTGACC
TATGCGACCG AAAGCATGCG TCTGACCACG CGGCTGATGC AACTCGCATC GTGGCTCTTG
CTGCATCGCG CCGTGAAGGA AGGTGAGATG ACTTTGGCGC AGGCCAACCG CGAAAAGACC
AGGGTGAAGC TGACGGCGGC GGATCCCGGT CCGCAGGACA TGGTCGGGAA GCTGCCGGGG
CCGTTGCAGG ACCTGATCGC ACGGTCGATG AATTTGCAGG TGCGGGTGCG CCGCCTCGAC
ACCACCATCC ATACGCCGGC CGCCGAGCGG GGGCCGGCCG GCAATCCGCT GATGCCGCAA
CTCAACCGTC TCAAGGAAGC CTTCGAGCGC CAGATCGGCT GA
 
Protein sequence
MSDPSAGDTG LVQFSERLAG SSAFTALFRE GMDLVEATAA YLDGDGRTDA RTLERSVSLT 
YATESMRLTT RLMQLASWLL LHRAVKEGEM TLAQANREKT RVKLTAADPG PQDMVGKLPG
PLQDLIARSM NLQVRVRRLD TTIHTPAAER GPAGNPLMPQ LNRLKEAFER QIG