| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3544 |
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| Symbol | |
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| ID | 4030527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3898586 |
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| End bp | 3900475 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637971956 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_578733 |
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| Protein GI | 92119004 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCGG TAGAAGTGCG TGAGAATACC TCGAAAGCCG CGGCCATTGC GTTGCCGCTC
GATCGCTCCC CGAAGGCTGG AGCCGAAGCC GGAGCGTCGG GGCCTGCCGT GGCCGATCAG
ACCTCGCCGC CGGCCAGCGG CGCCCGCCGT GTCCCGTTGC GCCCGCTGCT TGCGCTCATG
CCGTATATCG CCCGCTACCG CGGACGGGCG CTGCTTGCGC TGGTCGCGCT GATCGTCGCC
GCACTGACGA CACTGGTGGT GCCGCTTGCG GTGCGCCGGA TCATCGACTT CGGCTTCACG
TCCGAAGGCG TCGCGATGAT CAACAACTAC TTCAGCATGA TGATCGGCGT CGTGGCCGTC
CTCGCCGGCG CCAGCGCGGC GCGTTATTTT CTGGTGACCA CCACCGGCGA GCGTATCGTC
GCCGATCTCC GGCGCGACGT CTTCGCCCAT CTGATCTCGC TGTCGCCGGT ATTCTTCGAC
ACCGCCCGCA GCGGCGAACT GGTCTCGCGG CTGACCGCGG ATACGACCCA GATCAAGTCC
GCGGTCGGCT CCTCGATATC GGTCGCGTTG CGCAACGTGG TGCTGTTTGT CGGCGCGGCT
TCGATGATGG TCATCACCAG CCCGCGGCTG TCCCTCCTGG TGCTGGCGGC GATCCCGCTG
ATCGTGCTGC CGCTGGTCGC ATTCGGACGC TGGGTGCGCC GCCTGTCGCG GAGCGCGCAG
GACAATCTTG CGGAAGCCAC CGCCTACGCC TCCGAACTGG TCGGCGGCAT CAGGACGGTG
CAGGCCTACA CCAACGAACG GCTCGCCGAT GTCCGTTTCG GCGGCGAGGT CGAGCAGGCC
TATCTGGCGG CGCGCAATTC GGCGCGCGCC CGCGCCGTGC TGACCGCGAT CATTATTTTC
ATCGTCTTCA CCAGCGTGGT CCTGATCCTC TGGATCGGAT CGCGCGACGT TCTCACCGGT
GACATGACGC CGGGCCGGCT CGGCCAGTTC GTGCTGTATG CCGCGTTCGC CGCGACCGGC
CTCGGCCAGC TCAGCGAAGT CTGGGGCGAG GTCGCCGCCG CATCCGGCGC GGCCGAGCGC
CTGTTCGAGC TTCTTCGCGT CAAGCCGGTG ATCGCGCCGC CGCCGGCGCC GCGCGCGCTG
CCGGTGCCGT CGCGCGGCGA TGTCGTGCTG GACGACGTCA GCTTTGCCTA TCCGTCGCGG
CCGCAGGTCA AGGTGCTCGA CGGCGTCTCG CTGGCGGTGA GGGCCGGCGA GAAGGTTGCC
ATCGTCGGCC CGTCCGGCGC GGGAAAAAGC ACAATATTTC ACCTGCTGCT GCGGTTCTAC
GATCCGGCCG CCGGGACCAT CTGCTTCGAT GGCGTTCCGC TGCAGGCGGC CGATCCGCGC
GAGATTCGCG CACGCATCGC GCTGGTGCCG CAGGAATCGG TGGTGTTTGC CGCGTCCGCC
CGCGAGAACA TCCGCTTCGG CCGGCCGGAT GCGTCCGATG CCGATGTCGA GCGTGCCGCC
GATCTCGCCC ATGCCACCGA GTTCATTCGC CGCTTGCCCG GCGGCTTCGA GGCGCTGCTC
GGCGAGCGCG GCGTGACGCT GTCCGGCGGC CAGCGCCAGC GCATCGCCAT CGCCCGCGCC
ATCCTGCGCG ACGCGCCGCT CTTGCTGCTG GATGAGGCGA CGTCGTCGCT TGACGCAGAA
TCTGAGACCC TGGTGCAGAC TGCGCTGGAA GAACTGATGC GCCACCGCAC CACGCTGGTG
ATCGCGCATC GTCTGGCGAC GGTGCTGTCG TGCGACCGGA TCATGGTGAT GGATCAGGGA
CGGATCGTGG AGCAGGGCAC CCACGCCTCG CTGGTGGCCG CGAACGGATT GTATGCCCGG
CTGGCGCGGC TGCAGTTCGA GGGCGTGTAG
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| Protein sequence | MSPVEVRENT SKAAAIALPL DRSPKAGAEA GASGPAVADQ TSPPASGARR VPLRPLLALM
PYIARYRGRA LLALVALIVA ALTTLVVPLA VRRIIDFGFT SEGVAMINNY FSMMIGVVAV
LAGASAARYF LVTTTGERIV ADLRRDVFAH LISLSPVFFD TARSGELVSR LTADTTQIKS
AVGSSISVAL RNVVLFVGAA SMMVITSPRL SLLVLAAIPL IVLPLVAFGR WVRRLSRSAQ
DNLAEATAYA SELVGGIRTV QAYTNERLAD VRFGGEVEQA YLAARNSARA RAVLTAIIIF
IVFTSVVLIL WIGSRDVLTG DMTPGRLGQF VLYAAFAATG LGQLSEVWGE VAAASGAAER
LFELLRVKPV IAPPPAPRAL PVPSRGDVVL DDVSFAYPSR PQVKVLDGVS LAVRAGEKVA
IVGPSGAGKS TIFHLLLRFY DPAAGTICFD GVPLQAADPR EIRARIALVP QESVVFAASA
RENIRFGRPD ASDADVERAA DLAHATEFIR RLPGGFEALL GERGVTLSGG QRQRIAIARA
ILRDAPLLLL DEATSSLDAE SETLVQTALE ELMRHRTTLV IAHRLATVLS CDRIMVMDQG
RIVEQGTHAS LVAANGLYAR LARLQFEGV
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