Gene Nham_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3524 
Symbol 
ID4030794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3875999 
End bp3877363 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID637971936 
Productmagnesium transporter 
Protein accessionYP_578713 
Protein GI92118984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCT ACACCGCCAC GGACGGAGAC CTCGATGTGT TCGCGCTGGC CTCGCGCCTG 
AGCGATGGGC ATGTCGCCGA CAACGTCGAA ATCCTCAACC AGCTCGCGCC GCGGGACGCG
GCCGCGGTGC TGGTGCTGCT GCCGGTCGAT ATTTCGGTCG AGATCCTCGA CAAGCCCGAG
CTGAATTTCG GCCCCGAGAT CGTTGAGGCG CTGCCGCGGC AGACCGCGAC GCTCATGCTG
GCCGGCATGT CGGCCGACAT GGCCGCCGAC ATCGTGCAGC GGCTCGAGGA GCCGGCCCGC
ACCGAGCTGA TGCAGGGGCT CGACGCGGCG ACGCGCACGA CCATCGAGGG CCTGCTCGCC
TACCCGGAAA ACACGGCGGG CGCGATGATG ACGACCGAGT TCGTCAGCGT GCCCGCGACC
TGGACCGTGG AGCGCACCTT GCAGCACATC CGCCAGGTCG AGCGCACCCG CGAGACGGTC
TATGCCATCT ATGTCCTGGA TGCCTTCACC CGCCGGCTGG TCGGCGCGGT GTCGCTGCGG
CGGCTGATCG CCGGCGAGCC ATTGGTCAGG ATCGCCGATC TGGCGCGCTC GCCGATCACC
ACCTCGCCGC TGACGGACCG CGAGGAGGTG GCGCGGCTGA TCTCGCGGCA CGACATGCTG
GCGGTGCCTG TGATCGATAA GGCCGGGCAT GTGCTCGGCA TCGTCACGGT CGACGACATC
ATCGACGCCA TCATCGAGGA AAATACCGAG GACGTGCAGA AGTTCGGCGG TATGCAAGCG
ACCGACGAGC CTTATCTGCA GGTCGGGCTC GCGGCGATGA TCCGCAAGCG TGGCGGCTGG
CTCGCGGTGC TGTTTCTCGG CGAGATGCTG ACCGCCAGCG CCATGCAGCA CTTCGAGGGC
GAACTGGAAA AGGCCATCGT GCTGACGCTG TTCATCCCGC TGATCATGAG TTCCGGCGGC
AATTCCGGGT CGCAGGCGAC CTCGCTGCTG ATCCGTGCGC TGGCGCTGCG CGAGGTGAAA
CTCGGCGACT GGTGGCGCGT CGCCTTCCGC GAACTGCCGA CGGGCCTGAT CCTCGGCGCC
ATGCTGGGCG TGATTGGCAT CGTCCGCGTG GTGGCCTGGC AGAAGCTCGG CATCTACGAC
TATGGCGAGC ACTGGATTCT GGTCGGGCTG ACTGTCGCGG CCGCGCTGAT CGGCGTCGTG
ACCTTCGGCT CGGTGGCGGG ATCGATGCTC CCGTTCATCC TGCAACGCGC CGGCTTCGAC
CCTGCCAGCG CCTCGGCGCC GTTCGTCGCC ACGCTGGTCG ATGTCACCGG CCTGATGATC
TATTTCAGCG TCGCGCTGCT GATTTTGCGC GGGACGCTGT TGTAA
 
Protein sequence
MDTYTATDGD LDVFALASRL SDGHVADNVE ILNQLAPRDA AAVLVLLPVD ISVEILDKPE 
LNFGPEIVEA LPRQTATLML AGMSADMAAD IVQRLEEPAR TELMQGLDAA TRTTIEGLLA
YPENTAGAMM TTEFVSVPAT WTVERTLQHI RQVERTRETV YAIYVLDAFT RRLVGAVSLR
RLIAGEPLVR IADLARSPIT TSPLTDREEV ARLISRHDML AVPVIDKAGH VLGIVTVDDI
IDAIIEENTE DVQKFGGMQA TDEPYLQVGL AAMIRKRGGW LAVLFLGEML TASAMQHFEG
ELEKAIVLTL FIPLIMSSGG NSGSQATSLL IRALALREVK LGDWWRVAFR ELPTGLILGA
MLGVIGIVRV VAWQKLGIYD YGEHWILVGL TVAAALIGVV TFGSVAGSML PFILQRAGFD
PASASAPFVA TLVDVTGLMI YFSVALLILR GTLL