Gene Nham_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3520 
Symbol 
ID4030790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3873262 
End bp3873723 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID637971932 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_578709 
Protein GI92118980 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.22411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGC CCGCGCCGGC AACCCATCTC GACGGCGCGA TCCGCGACGG CAGGCATCAC 
ATGCAGATCC GCGTCTATTA CGAAGACACG GATTTTACGG GCCTCGTCTA TCACGCCAAC
TATCTGCGCT TCATGGAGCG CGGGCGCAGC AATTATCTGC GGCTGCTCGG CGCCGACCAG
CGCGCGCTGT TCGCGGAGGC CGAAAGCGAG GCGCCGGGTT TTGCCTTCGT GGTGCGCTCG
ATGCAGCTTG AGTTTCTGAA ATCCGCGCGG ATGGACGACG TGCTCGACAT CGTGACGCGG
CCGCTGGATG TCCGCGGCGC CTCGATCACC TTGCATCAGG AGGTGCGGCG CGGCGAGGTG
CTGCTGCTGG ATGCCAAAGT GAAGGTGGCG TTTGTTTCGG AGGGGCGCGC GAAGCCGATT
CCGAAGCCGT TGCGGATGGC AATGAAGGCG GATCAAATCT GA
 
Protein sequence
MNSPAPATHL DGAIRDGRHH MQIRVYYEDT DFTGLVYHAN YLRFMERGRS NYLRLLGADQ 
RALFAEAESE APGFAFVVRS MQLEFLKSAR MDDVLDIVTR PLDVRGASIT LHQEVRRGEV
LLLDAKVKVA FVSEGRAKPI PKPLRMAMKA DQI