| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3512 |
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| Symbol | tolB |
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| ID | 4029443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3866266 |
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| End bp | 3867618 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971924 |
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| Product | translocation protein TolB |
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| Protein accession | YP_578701 |
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| Protein GI | 92118972 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATC GAGATGACTT GTCGAAGATG CCGTTTCACC CGAGCCGCCG CCAGATGATC
TCCGGGATGG CCTCGGCCGC CGTGTTGCTG GGCGGCGGGC GAGCCTTCGG ACAGGCGCGG
GTGCAGATCG ACCAGGGCAA TGTGGCGCCG CTCCCGATCG CCATTCCGAA TTTCGTTGCA
GGCTCGCCGT CGGATAGCGA GGTCGGCGCC GGCGTCGCCA AGGTCATCAC CAACAATCTC
AAGCGCAGCG GGTTGTTCGC GCCGATAGAC CAGGCCGCGT ATATCGAGAA GATCACCAAT
ATCGACGTGC CGCCGCAGTT CGCCAACTGG AAGACCATTA ACGCGCAGGC GCTGGTGACC
GGGCGTATGA CGCGCCAGGG CGACGGGCGG CTCAAGGCCG AGTTTCGCCT GTGGGACGTC
GCGACCGGCC AGCAGCTCGC AGGCCAGCAA TATTTCACGT CGCCGGAATA CTGGCGGCGG
ATCGCGCACA TCATCTCGGA TCAGATCTAC GAACGTCTGA CCGGCGAGAA AGGCTATTTC
GACAGCCGCG TCGTGTTCGT CGACGAGTCC GGGGCCGCAC AACACCGCAT CAAGCGTCTG
GCGCTGATGG ATCAGGACGG CGCCAACGTG CGCTATCTGA CGCGCGGCGC CGACCTCGTG
ATCACGCCGC GCTTTTCGCC CTCGACCCAG GAAATTACCT ACATGGAATT CGGGCAGGGC
GATCCGCGGG TTTATCTGTT CAACATCGAA ACCGGACAGC GCGAAATCGT CGGTAACTTT
CCCGGTATGT CATTCTCGCC GCGTTTTGCG CCCGATGGTC AGCGCATCAT CATGAGTCTG
CAGCAAGGCG GAAACTCGAA CCTGTTCGTG ATGGACCTTC GCTCGAAGTC GACCACGCGT
CTGACCGACA CGCCGGCCAT CGACACGTCG CCGTCCTATT CGCCCGACGG CGGCCGCATC
TGCTTCGAGT CGGATCGCGG CGGCAGGCCC CAAATCTATG TGATGGGGGC GACCGGCGGT
GCGGCGCAGC GCATCTCGTT CGGCGAGGGT TCCTACTCGA CCCCGGTCTG GTCGCCGCGC
GGCGATTACA TCGCCTTCAC CAAGCAGGGT GGCGGCCAGT TTTCCATCGG CATCATCAAG
CCGGATGGTT CGGGCGAGCG GATCCTGACG TCGGGATTTC ACAACGAGGG CCCGACTTTC
GCGCCGAACG GCCGGGTCCT GATGTTCTTC CGCGACCCCG GCGGCAACAG CGGGCCGTCG
CTCTATACGA TCGACGTCTC CGGCCGCAAT GAATTGAAGG TTCCCACGCC CGGTTTCGCA
TCCGATCCGG CATGGTCGCC CCTGCTCTCA TAG
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| Protein sequence | MIDRDDLSKM PFHPSRRQMI SGMASAAVLL GGGRAFGQAR VQIDQGNVAP LPIAIPNFVA
GSPSDSEVGA GVAKVITNNL KRSGLFAPID QAAYIEKITN IDVPPQFANW KTINAQALVT
GRMTRQGDGR LKAEFRLWDV ATGQQLAGQQ YFTSPEYWRR IAHIISDQIY ERLTGEKGYF
DSRVVFVDES GAAQHRIKRL ALMDQDGANV RYLTRGADLV ITPRFSPSTQ EITYMEFGQG
DPRVYLFNIE TGQREIVGNF PGMSFSPRFA PDGQRIIMSL QQGGNSNLFV MDLRSKSTTR
LTDTPAIDTS PSYSPDGGRI CFESDRGGRP QIYVMGATGG AAQRISFGEG SYSTPVWSPR
GDYIAFTKQG GGQFSIGIIK PDGSGERILT SGFHNEGPTF APNGRVLMFF RDPGGNSGPS
LYTIDVSGRN ELKVPTPGFA SDPAWSPLLS
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