| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3505 |
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| Symbol | |
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| ID | 4029436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3853659 |
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| End bp | 3856472 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971917 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_578694 |
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| Protein GI | 92118965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG CCGCCTCGAA GTCCAAGAAG CCTGCAGCGA AATCAAAACC ATCTGCAACA
CCTCGGGCGA AGGCTCCAGG TTCCGGCGGC GCGCGCAAGG CGACGAATAA GGCAGCAAAG
GCGGCGGCGC CGGTGAGGGA CAAGTGGGTC TATACGTTCG GGGATGGCAG GGCGGAAGGT
AAAGCGGAGC TGAGGGAGCT GCTCGGCGGC AAGGGCGCCA ATCTCGCCGA GATGGCCAAT
CTCGGTTTGC CGGTGCCTCC CGGTTTCACG ATTCCGACCT CGGTATGCGC GTTTTTCTAT
GCGCACGACA AATCCTATCC GAAGGAACTG AAGCAGCAGG TCGAAAAGGC GCTGGACCAC
GTCGCAAAGA TTACCGGAAA GGTGTTCGGC GACGCCAAGA ATCCGCTGCT GGTCTCGGTA
CGATCAGGCG CCCGTGCGTC GATGCCCGGC ATGATGGACA CGGTGCTCAA TCTCGGCCTC
AACGACAAGA CCGTCGAGGC GCTGGCCGCG ATGTCCGGCG ACCGGCGATT TGCCTATGAC
AGCTATCGCC GCTTCATCGC CATGTACTCG GATGTCGTGC TCGGCTTCGC GCATCATCAT
TTCGAAGACA TTCTGGATAC CTTCAAGGAC ACCAAGGGCT ATTCGCTCGA TACCGACCTG
ACCGGCGACG ACTGGATCGA GGCGGTGGGT AAGTACAAGA CGGCCGTTGC ACGCGAGACC
GGCAAGGATT TTCCGCAAGA TCCTCATGAG CAGTTGTGGG GCGCGATCGG CGCGGTGTTC
TCGTCGTGGA TGAATGCGCG GGCGGTCACC TATCGCCGCC TGCACACCAT TCCGGAATCA
TGGGGCACCG CCGTCACCGT GCAGGCCATG GTATTCGGCA ACCTGGGCGA GACATCGGCC
ACCGGCGTGG CGTTCACGCG CAATCCGTCG ACCGGCGAGA GCAGGCTCTA CGGAGAGTTT
CTCATCAACG CCCAGGGCGA GGACGTGGTG GCGGGCATCC GCACGCCGCA GGACATCACC
GAGGCGGCGC GCCAGGAGTC CGGCTCCGAC AAACCGTCGA TGGAAATGGC GATGCCCGAA
GCTTTCAAGG AGCTGACGCG CATCTACACC CAGCTCGAAA AGCACTATCG CGACATGCAG
GACATGGAGT TCACCGTCGA GGACGGCAGG CTCTGGATGC TGCAGACCCG CAGCGGCAAG
CGCACCGCGC GCGCCGCCCT GCGCATCGCG GTCGAACTCG CCAATGAGGG CCTGATCTCG
AAGAAGGACG CGGTGGCTCG GATCGATCCG GCCTCACTCG ATCAGTTGCT CCATCCGACC
ATCGACCCCA ACGCGACGCG CGACGTGATT GCGACCGGCC TGCCGGCCTC GCCCGGCGCC
GCGGCCGGCG AGATCGCGTT TTCCCCGGAT GAAGCGACCA AGCTGCAGGC CGACGGACGC
AAGGTTATCC TGGTGCGGAT GGAGACCAGC CCGGAAGACA TCCACGGCAT GCACGCCGCC
GAGGGCATCC TGACCACACG CGGCGGCATG ACCTCGCACG CGGCGGTGGT CGCGCGCGGC
ATGGGCAAGC CCTGCGTCTC CGGCAGCGGC AGCATCCGCG TCGACTATGG CCGCGGCACC
ATGACCGTCG GCGACCGCAC CTTCAAGGCC GGCGACGTCA TCACCATCGA CGGCTCGCTT
GGCGAGGTGC TGGCGGGGCA GATGCCGATG ATCGAGCCGG AACTGTCGGA CGAGTTCGGC
ACGCTGATGG GCTGGGCCGA TCAGGTGCGC AAGCTCGGCA TCCGCGTCAA CGGCGATACC
CCCGCCGACG CGCGCACCGC GATCAAATTC GGCGCCGAAG GCATCGGTCT GTGCCGCACC
GAGCACATGT TCTTCGAGGA GACTCGCATC CGTACCGTAC GCGAGATGAT CCTGGCCGAA
GACGAGCAGG CGCGCCGCGC CGCGCTGTCG AAGCTGCTGC CGATGCAGCG CGCCGATTTC
GTCGAGCTGT TCGAGATCAT GAAGGGCCTG CCGGTCACGA TCCGGTTGCT CGATCCGCCG
CTGCATGAGT TCCTGCCGCA TACGCAAGCC GAGATCGAGG AAGTCGCGCG TGCGATGAAT
ACCGATCCGC GAAGGCTGGC CGACCGCGCC CGCAGTCTGG CCGAATTCAA CCCGATGCTC
GGCTTTCGCG GCTGCCGTCT CGCGATCGTC TATCCTGAGA TCGCCGAAAT GCAGGCGCGG
GCGATCTTCG AGGCCGCGGT CGAGGCCGGC AAGCGCACCG GAAAGGCCGT CGCCGTCGAA
GTCATGGTGC CGCTGATCGC GACCAAAGCG GAGTTCGATC TGATCAAGGC GCGGATCGAT
GCGACCGCGC AGTCGGTGAT GCGCGAGACC GGCGGCAAGC CGACCTATCA GGTCGGTACC
ATGATCGAAC TGCCGCGCGC CTGTCTTGTG GCAGGAGAGA TCGCCGAGAC CGCGGAATTC
TTCTCGTTCG GCACCAACGA TCTGACGCAG ACCACCTTTG GCATCAGCCG CGACGACGCG
TCGAGCTTTC TCGGCACCTA TATCGCGAAG GGGATTATGG AGATCGATCC GTTCATCTCG
GTGGACCGCA ACGGTGTCGG GGAACTGGTG AAGATCGGCG TCGCGCGCGG CCGCAAGACC
CGGCCGAACC TCAAGGTCGG CATCTGCGGC GAACACGGCG GCGATCCGGT TTCGGTGGCA
TTCTGTCACG AGATCGGATT GAACTATGTG TCGTGCTCTC CATACCGCGT GCCGATCGCG
CGCCTTGCCG CCGCGCAGGC GGCGCTTGGA AAGACCCTCG CAAAGAGGGC GTGA
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| Protein sequence | MAKAASKSKK PAAKSKPSAT PRAKAPGSGG ARKATNKAAK AAAPVRDKWV YTFGDGRAEG
KAELRELLGG KGANLAEMAN LGLPVPPGFT IPTSVCAFFY AHDKSYPKEL KQQVEKALDH
VAKITGKVFG DAKNPLLVSV RSGARASMPG MMDTVLNLGL NDKTVEALAA MSGDRRFAYD
SYRRFIAMYS DVVLGFAHHH FEDILDTFKD TKGYSLDTDL TGDDWIEAVG KYKTAVARET
GKDFPQDPHE QLWGAIGAVF SSWMNARAVT YRRLHTIPES WGTAVTVQAM VFGNLGETSA
TGVAFTRNPS TGESRLYGEF LINAQGEDVV AGIRTPQDIT EAARQESGSD KPSMEMAMPE
AFKELTRIYT QLEKHYRDMQ DMEFTVEDGR LWMLQTRSGK RTARAALRIA VELANEGLIS
KKDAVARIDP ASLDQLLHPT IDPNATRDVI ATGLPASPGA AAGEIAFSPD EATKLQADGR
KVILVRMETS PEDIHGMHAA EGILTTRGGM TSHAAVVARG MGKPCVSGSG SIRVDYGRGT
MTVGDRTFKA GDVITIDGSL GEVLAGQMPM IEPELSDEFG TLMGWADQVR KLGIRVNGDT
PADARTAIKF GAEGIGLCRT EHMFFEETRI RTVREMILAE DEQARRAALS KLLPMQRADF
VELFEIMKGL PVTIRLLDPP LHEFLPHTQA EIEEVARAMN TDPRRLADRA RSLAEFNPML
GFRGCRLAIV YPEIAEMQAR AIFEAAVEAG KRTGKAVAVE VMVPLIATKA EFDLIKARID
ATAQSVMRET GGKPTYQVGT MIELPRACLV AGEIAETAEF FSFGTNDLTQ TTFGISRDDA
SSFLGTYIAK GIMEIDPFIS VDRNGVGELV KIGVARGRKT RPNLKVGICG EHGGDPVSVA
FCHEIGLNYV SCSPYRVPIA RLAAAQAALG KTLAKRA
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