| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3488 |
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| Symbol | |
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| ID | 4029341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3837406 |
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| End bp | 3838932 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637971899 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_578677 |
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| Protein GI | 92118948 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGACA CGTCAAAACA CGACAAGAAC GCCAAAGACC TGTTCGACAG CGAACACCGG
TTTCGGCTTC TCGTCGAAGG TGTCATCGAC TACGCGATCT ACATGATGGA CCCCACGGGG
ATCATCACCA ACTGGAATAC AGGCGCGGAA CGCATCAAGG GCTATCGCCC CGACGAAATC
ATCGGTCAGC ATTTTTCGCG GTTTTATACC GACGCGGACC GCGCTGCGGG GCGCCCTGCC
CGCGCATTGC AAATTGCCAG CGACACCGGG CATTACGATG AGGAAGGCTG GCGGGTTCGC
AAGAACGGAT CGTTCTTCTG GGCCAGCGTC GTCATCGACG CCATCCGCGA CGACTCCGGA
AACCTCATCG GCTTCGCCAA GATCGCGCGG GACATCACGG AACGCCACGA GGCCCAGCAA
AAACTCGAGC GCGTGCAGCG GCAGCTCGCG GAATCGCAGA AGATGGACGC GCTCGGCCAG
CTCACCGGCG GCGTCGCTCA CGACTTCAAC AATCTGCTGA TGATTGTCAG CGGAAACATC
CAGACCCTGA AAACAATCGT CGAGAACGAC CCGAGGGCCA TGCGGGCGGT TCACGCCATC
GAGACCGCGA CCCAACGCGG AGCTGCGCTC ACCCGGCAGC TCCTGACATT CTCCCGGCGG
CAGAGCGTCA ACCCGTTGCC GACCGCCGTC GCGGATCGCA TTCGATCGAT CGCCGCCGTT
CTCGAGAGCG GCCTTGGCAA CACCATCGCC CTGCATATCG ACACGCCTGA CGACTTGTGG
CGCGTCACGA TTGACGCAAC CGAATTCGAA ACGGCGATGC TCAATCTGGT CATCAACGCA
CGCGACGCCA TGACAAACGG CGGACACGTC GTCGTGCGGG CGCGAAACAT AGTCCCAACG
GACGAGGCTG AAGAACGCTA CATTGCGATT TCAGTCGAGG ATACCGGCCA CGGTATCCCG
GCGGACATCC TGGCCAGAGT ATTCGATCCG TTCTTCACGA CGAAATCTGT CGGGAAGGGA
ACAGGTCTCG GACTATCGCA GGTGCACGGT TTCGCTCATC AAGCCGGCGG CCATGTCGGC
ATCGACAGCG AGCTTGGCCG CGGCACCGTG GTTACGATCT ATCTTCCGCC GACCGAAACG
CTGGATGCCA AGGGCAACGG GCAGGGCCAC CGCGACGCAA GCGGCACCGT CCTGCTCGTC
GAGGACAATC CGGATGTCGC GAATGCGAGC GCCGGATTGC TCGAACAGCT CGGCTATCGT
GTGCGGATCT CCAACAATGC CGAAGCGGCG TTGTTGGAGA TCGAACGCAA TAGCGTCGAT
CTGGTTTTCA GTGACATCGT AATGCCGGGA AAAATGGACG GCCTCGGTCT GGCGAAGGCG
CTTCGCGCGA CACATCCGCA TTTGCCGGTG TTGCTGGCCT CCGGTTACAG CGAGGCGCTC
GCCGGAGGCC AGACGGATTT TCACATTCTC CGGAAACCCT ACGCCATTCA CGAACTCAGC
CAGGCCCTCG CCAAGCTGTC GTATTGA
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| Protein sequence | MPDTSKHDKN AKDLFDSEHR FRLLVEGVID YAIYMMDPTG IITNWNTGAE RIKGYRPDEI
IGQHFSRFYT DADRAAGRPA RALQIASDTG HYDEEGWRVR KNGSFFWASV VIDAIRDDSG
NLIGFAKIAR DITERHEAQQ KLERVQRQLA ESQKMDALGQ LTGGVAHDFN NLLMIVSGNI
QTLKTIVEND PRAMRAVHAI ETATQRGAAL TRQLLTFSRR QSVNPLPTAV ADRIRSIAAV
LESGLGNTIA LHIDTPDDLW RVTIDATEFE TAMLNLVINA RDAMTNGGHV VVRARNIVPT
DEAEERYIAI SVEDTGHGIP ADILARVFDP FFTTKSVGKG TGLGLSQVHG FAHQAGGHVG
IDSELGRGTV VTIYLPPTET LDAKGNGQGH RDASGTVLLV EDNPDVANAS AGLLEQLGYR
VRISNNAEAA LLEIERNSVD LVFSDIVMPG KMDGLGLAKA LRATHPHLPV LLASGYSEAL
AGGQTDFHIL RKPYAIHELS QALAKLSY
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