Gene Nham_3487 details

Gene Information

• Locus tag: Nham_3487
• ID: 4029340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3836582
• End bp: 3837235
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637971898
• Product: HhH-GPD
• Protein accession: YP_578676
• Protein GI: 92118947
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTCC ACCTGAAAAC CCAATCCGAT CTCGACGACG CCGTCAACGC GCTGGTGAAG 
CAGGATCCGC GACTGAGGCC GATCGTGGAT CGCACCGGCC TTCCCGCCCT GCGCCAACGC 
CAGCCTGGCT TCGAAGGCCT CGCCGCGATC GTCTGCGGCC AGCAACTGTC GACCGCGAGC 
GCTGGCGCGA TCTGGGGACG GCTCAGCGCC GCCTTCGCGC CGTTCCATCA CGATGCGATC 
GGCAAAGCGC GCGCCGACCG GCTCGGCCGG CTGGGATTGT CGGCGGCAAA GATCACCACG 
CTGAAACTGC TCGCGCGCGA GATCGCTGCG GGGCGGCTCA ACCTCGACGT GCTCGCCGAG 
GAGGATGCCG ACGCCGCCCA TGCCACGCTG GTCCGGCATC GCGGCATCGG ACCGTGGACC 
GCCGATGTCT ATCTGCTGTT TTGTCTGGGC CACGGCGATG CCTGGCCCGC GGGCGATGTC 
GCGCTTCAGG AGGCGATCAA GGTCGGCCTC GGGCTAACGA CGCGGCCCAC GCCGAAACAG 
ATGGTGCCGC TCGCGGAGCC ATGGCGACCC TTGCGCGGAG CGGCCGCGCA TCTGTGGTGG 
GCGTATTACA AGGTCATCAA GAACCGCGAA GGCGTAATCG CTGGACCGAA GTGA 

 

Protein sequence

MTVHLKTQSD LDDAVNALVK QDPRLRPIVD RTGLPALRQR QPGFEGLAAI VCGQQLSTAS 
AGAIWGRLSA AFAPFHHDAI GKARADRLGR LGLSAAKITT LKLLAREIAA GRLNLDVLAE 
EDADAAHATL VRHRGIGPWT ADVYLLFCLG HGDAWPAGDV ALQEAIKVGL GLTTRPTPKQ 
MVPLAEPWRP LRGAAAHLWW AYYKVIKNRE GVIAGPK