Gene Nham_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3477 
Symbol 
ID4029330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3827399 
End bp3828796 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content63% 
IMG OID637971888 
Productargininosuccinate lyase 
Protein accessionYP_578666 
Protein GI92118937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA AGATGTGGGG CGGCCGGTTC GGCGAAGGTC CCGACGCGAT CATGGAAGAA 
ATCAACGTCT CTATCGACGT AGATCGCCAT CTCTACGCCC AGGACATTGC CGCGTCCAAG
GTCCACGCTG CCATGCTTGC CGCTCAAGGC ATCATTACGG CGGATGATGC AAAAAACATA
GACAAGGGTC TAGACACGAT TTTGTCAGAG ATCCGCAATG GTACCTTCGA CTTTAAGCGG
GCGCTTGAGG ACATTCACAT GAATGTGGAG GGTCGGCTCG GGGAGATGAT CGGCGCTGCA
GCCGGACGAT TGCATACCGC GCGTTCGCGC AACGATCAGG TTGCGACCGA TTTCCGCCTC
TATGTCCGCG ACGTCATCGA CGAGACCGAT GCGGCGCTCG CGGCCTTTCA ACATGCCCTG
CTGACGCGCG CGCTAGAGCA TTCCGGGACG GTGATGCCGG GCTTCACGCA TTTGCAGACC
GCGCAGCCGG TCACCTTCGG TCATCATCTG ATGGCCTATG TCGAGATGGC GGCGCGCGAT
CGCGGCCGGT TTGCCGATGC GCGCAGGCGC CTGAACGAGA GCCCGCTTGG GGCGGCGGCG
CTCGCGGGCA CGTCCTTTCC GATCGATCGC GACGCTACCG CCAAGGCACT CGGTTTCGAT
CGCCCGATGG CGAATTCGCT CGATGCGGTC TCCGATCGCG ATTTCGTGCT GGAGACACTC
TCGGCCGCGG CGATCGCATC CATACATCTG TCGCGCTTCG CCGAGGAGAT CGTGATATGG
ACCTCGCCCC TCGTCGGCCT TGTGCGGCTC TCCGACAAGT TCACCACTGG CTCGTCGATC
ATGCCGCAGA AGCGCAATCC CGACGCCGCC GAACTGGTGC GCGCCAAGAC CGGCCGTGTC
GTCGGCGCGC TCACGGGGCT GCTGATCGTG ATGAAGGGAC TGCCGCTGGC CTATCAAAAG
GACATGCAGG AAGACAAGCA GGGTGCGATG GAGGCGTTCG GCGCGCTCTC GCTGGCGATC
CGCGCCATGA CCGGCATGGT CGCCGACCTT GTGCCGGATG AGGCGCGAAT GAAGGCCGCG
GCCGGTGACG GCTATGCCAC CGCGACCGAT CTCGCCGACT GGCTGGTGCG GACGCTGAAG
ATGCCGTTCC GCGATGCGCA TCATGTCACC GGGCGGATCG TCGCCGCCGC ATCGAAGCAG
GGCGTGGCGC TGCATGAACT GGCGCTTCAG GACATGCAGG CGGTCGAGCC GCGCATCACC
CGCGATGCGC TTGCGGTGCT GTCTGTCGAG GCGTCGGTGA AAAGCCGGAC GAGCTATGGC
GGGACCGCGC CGAAAAACGT CCGCTCGCAA GCCAACGCCT GGCTCAAGCG GCTGGAAAAA
GAGCGAAAAT TGGGCTGA
 
Protein sequence
MSNKMWGGRF GEGPDAIMEE INVSIDVDRH LYAQDIAASK VHAAMLAAQG IITADDAKNI 
DKGLDTILSE IRNGTFDFKR ALEDIHMNVE GRLGEMIGAA AGRLHTARSR NDQVATDFRL
YVRDVIDETD AALAAFQHAL LTRALEHSGT VMPGFTHLQT AQPVTFGHHL MAYVEMAARD
RGRFADARRR LNESPLGAAA LAGTSFPIDR DATAKALGFD RPMANSLDAV SDRDFVLETL
SAAAIASIHL SRFAEEIVIW TSPLVGLVRL SDKFTTGSSI MPQKRNPDAA ELVRAKTGRV
VGALTGLLIV MKGLPLAYQK DMQEDKQGAM EAFGALSLAI RAMTGMVADL VPDEARMKAA
AGDGYATATD LADWLVRTLK MPFRDAHHVT GRIVAAASKQ GVALHELALQ DMQAVEPRIT
RDALAVLSVE ASVKSRTSYG GTAPKNVRSQ ANAWLKRLEK ERKLG