Gene Nham_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3474 
Symbol 
ID4029995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3824641 
End bp3825201 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID637971885 
Productcytochrome c, class I 
Protein accessionYP_578663 
Protein GI92118934 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTG GGAGTGATAC AGTGCATTCA AACCGGACCA ACGCTATTCT CGGCGCACTG 
CTGGGAACAT TGTTGTTTGT GCAAGTAGTA CGCATCATCG ACGAGTCGTT CAGCGGACCA 
GAGAAGTCGC ACTCTGAAGC TGCTCATAAA GCCGATGCCA AGGAAGCCAC CGCCAAGACC 
GAGCATTCGG CGGCGGCTGA CGCGGCGTCG TTCAATAAGG CGCTTGCCAG CGCCAATGCC 
GAGCGCGGTG CCGGGCTCGT CAAGCAGTGC CAGATTTGCC ACAACACCGA GGAAGGCAAA 
GGCCCCAAGA TCGGCCCTGA CCTCTATAAC ATCGTCGACC GGCCGGTCGC TTCGCAGCCG 
GGCTTTAACT ACTCCGCAGC CTTGAAGGCC AAGGGCGGCA AATGGACCTT CGCCGAGCTC 
AACGAATGGA TCAATGATCC GAAGGGCTAC GTCAAGGGCA CGTCCATGAG CTTCGCCGGC 
TTGAAGAGCG AGAGCAAGCG CGCTGACCTG GTGGCGTATC TCGCAACGCT CTCGAAGAAC 
CCTGTGCCGC TGCCGAAGTA G
 
Protein sequence
MTSGSDTVHS NRTNAILGAL LGTLLFVQVV RIIDESFSGP EKSHSEAAHK ADAKEATAKT 
EHSAAADAAS FNKALASANA ERGAGLVKQC QICHNTEEGK GPKIGPDLYN IVDRPVASQP 
GFNYSAALKA KGGKWTFAEL NEWINDPKGY VKGTSMSFAG LKSESKRADL VAYLATLSKN 
PVPLPK