Gene Nham_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3459 
Symbol 
ID4029980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3809969 
End bp3810619 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID637971870 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_578648 
Protein GI92118919 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.788459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG CGCCACAGCA CCCGCAGCAA CCCGCCACCG GGACTCCCGC CACGCCGAAG 
GCCGCGCCGC GCGTGGGCCG CGACGTGAGG ATCGGCGCGA CCTGCGGCCT GCTGGTCGCG 
CTCATGGTCG GCGCCGCCTA CGCCGCGGTG CCGTTCTACA ACTGGTTCTG CCGCGCCACC 
GGTTTCAATG GAACCACGCA GGTCGCAAAA GTCGCGCCGA GCGCGGCACC GCTTGCGCGC 
ACGGTGGCGG TGCGCTTCGA CTCCAACATC TCCGGCGGGC TGCCGTGGAA GTTCGAGCCG 
GAACAGACCG AGATAAACGT CCGGATCGGC GAGGTCGCCA CCGTATATTA TACCGTCACC 
AACCATGCGG CGACCGCCAC GACGGGGCAG GCGGCCTATA ACGTCACGCC GCTGACGGTC 
GGATCGTATT TCACCAAGAT CAACTGCTTC TGTTTCACCG AGCAGACCCT GGCGCCCGGT 
GAGAAGCGGG AGATGGCCGT CGTCTTCTAT GTCGACCCGA GCTTCGCCGC CGACAGCGAA 
AATGACGGCG TCAGGACCAT AACCCTGTCC TATACCTTCT TCCCGGTGAA GGACGCCGCG 
CCGAAGCCGG TGGCGGCGAG CGAACCGGAC AGGCCAGGGG GAAGCATCTG A
 
Protein sequence
MTDAPQHPQQ PATGTPATPK AAPRVGRDVR IGATCGLLVA LMVGAAYAAV PFYNWFCRAT 
GFNGTTQVAK VAPSAAPLAR TVAVRFDSNI SGGLPWKFEP EQTEINVRIG EVATVYYTVT 
NHAATATTGQ AAYNVTPLTV GSYFTKINCF CFTEQTLAPG EKREMAVVFY VDPSFAADSE 
NDGVRTITLS YTFFPVKDAA PKPVAASEPD RPGGSI