Gene Nham_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3458 
Symbol 
ID4029979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3809012 
End bp3809866 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID637971869 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_578647 
Protein GI92118918 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.107293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACGG CGCAAGTCAA GCACGATTAC CACCTTGTCG ACCCGAGTCC GTGGCCGATC 
GTAGGCGCGA CCGCGGCCTT CGTCATGGCC GTCGGCGCCA TCCTGTGGAT GCATCATCTG
ACCGCGGTCG CGCCGATCAT TTTCGGCATC GGCGTGGTCG GCGTGCTCTA CACCATGGCG
AGCTGGTGGG CGGACGTGAT CCGCGAAGCC GAGCACAAGG GCGACCACAC CCGCGTGGTG
CAGATCAGCC ATCGCTACGG CATGATCCTG TTCATCACCT CCGAGGTGAT GTTCTTCGTC
GCCTGGTTCT GGGCCTTCTT CAATTCGGCG CTGTTCCCGG GCGATCCCGT GCACGCGACC
CGCGAGGTGC TGTTCGGCGG CGTCTGGCCG CCCAAGGGCA TCGAGACCTT CGACCCCTGG
CACCTGCCGC TGCTCAACAC CCTGCTCCTG CTGACCTCGG GCACCACGGT GACCTGGGCC
CATCATGCCC TGCTCAATGG CGACCGCAAG GGACTGAAGT GGGGGCTGAT CCTGACCATC
GCGCTCGGCG CTACCTTTAC CTGCGTGCAG GCCTACGAGT ACTCTGAAGC GGCCTTCAGC
TTCGCCGGCA ACGTCTACGG CGCCACCTTC TTCATGGCCA CCGGCTTCCA CGGCTTCCAT
GTGCTGGTCG GCACCATCTT CCTGATCGTC TGCCTGTTCC GCGCCAATGC CGGACACTTC
ACGCCGACGC AGCACCTCGG CTTCGAATTC GCCGCCTGGT ACTGGCATTT CGTCGACGTG
GTGTGGTTGT TCCTGTTCGT CTGCATCTAT GTCTGGGGCA ACGGCGCCTC GGCCATGGCG
CACGCCGCGC ACTGA
 
Protein sequence
MATAQVKHDY HLVDPSPWPI VGATAAFVMA VGAILWMHHL TAVAPIIFGI GVVGVLYTMA 
SWWADVIREA EHKGDHTRVV QISHRYGMIL FITSEVMFFV AWFWAFFNSA LFPGDPVHAT
REVLFGGVWP PKGIETFDPW HLPLLNTLLL LTSGTTVTWA HHALLNGDRK GLKWGLILTI
ALGATFTCVQ AYEYSEAAFS FAGNVYGATF FMATGFHGFH VLVGTIFLIV CLFRANAGHF
TPTQHLGFEF AAWYWHFVDV VWLFLFVCIY VWGNGASAMA HAAH