| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3452 |
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| Symbol | |
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| ID | 4031103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3803496 |
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| End bp | 3805472 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637971863 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_578641 |
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| Protein GI | 92118912 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTA AGCTGACGAT TGACGCCCTG CCGTTTTATA GCGGCATCGC CATGGCAGGT
GCGCTGACCG TCGTGTGCGG CGTGCTGGGC GTGGTCGTGC TCATCACGTG GCTCGGCCGA
TGGCGCTATC TGTGGACCGA ATGGCTGACG AGCCTCGACC ACAAGAAAAT CGGCATCATG
TACGTGGCAC TGGCGCTGAT CATGCTGGTG CGCGGCGTCA TCGACGCCCT GATGATACGG
ACCCAGCAGG CGTTCGCATT CGAACCGCAC GGCTATCTGC CGCCGGAGCA TTTCGATCAG
ATCTTCACGT CCCACGCCAC CATCATGATG TTCTTCGTGG CGATGCCGTT TGTGCTCGGC
CTGTTCAACA TCGTCGTTCC GCAGCAGATC GGTGCGCGCC AAATGGCGTT TCCGTTCATG
AACTCGGCGA GCCTGTGGCT GACCGCGTCC GGCGCCGCCC TGGTGATGAT CTCGCTGGTT
GTCGGCAAGT TCTCCACTGC CTACTGGACC GCTTACCCGC CCCAATCGGG AGTGCAACTC
AGTCCGGGCG TCGGCGTCGA CTACTGGATC TGGGCAATCC TGCTCAGCAG CGTCGGCGCG
ATGCTGAGCG GACTCAATTT TCTCGTCACC ATCGTCAAGC GTCGCGCACC CGGCATGCGG
CTGATGATGA TGCCGCTGTT CACGTGGACG GCGCTATGCA CCGGCATATT GATAATATTC
GCCTATCCGG CCTTGATCGT TGCCGCTGCA CTGCTTGGTC TCGATCGCCA TCTCGGCATG
CACTTCTTCA CCGGCGAAGG CGGCAACGTC ACGAACTATG TCAGCCTGTT CTGGATCTGG
GGTCATCCCC ACGTCTACAT CCTGATTTTG CCGGCGTTTG GCATCTATTC CGAAGTCGTG
GCAACTTTCT CGGGCAGGCG ATTGTCCGGC TACACCCCGC TCGTCTACTC CACCGTGGCC
ATCACCGCGC TCTCGTTCGT CGTCTGGCTG CACCATTTCT TCACCATGGG TTCAGGCGCC
GACGTGAACG CCTTCTTTGG CAGCGCGGCC CCGCTCATCG CCGTGCCGAC AGTCGTGACG
ATCGTCGGCT GGTTGCTCAC GATGTATCGC GGCCGCGTGC AATTCTCGGT GCCGATGCTG
TTTACGCTTG GGTTTGTCAT AACGTTCCTC GTAGGCGGCA TGACCGGCTT TTTGTTCGCG
GTCGCACCGT CTGATATGCA CAACACCACT TTCCGGGTGG CGCATTTCCA CAATTTGCTG
ATCCCCGGCG CGCTGTTCGG CTATTTCGCC GGCTACCAGT ATTGGTTTCC CAAAGCGTTC
GGCTTTCGTC TCGAGGAAAA GTGGGGCCGA CGAGCCTTCT GGTGCTGGAT CATCGGCTTC
TGTCTGGCCT TCATGCCGCT GTATGTTCTC GGCCTCATGG GCATGCCGCA GCGCCTCAAT
CGCAACGCTG TCGCCGACTG GCAGCCGTAT CTCATCGTCG CCCAATTCGG CGTCCTCTTC
ATCATGTGCG GCATCGCCTG CCTCGCCATC CAGATCGCCG TCAGCATCCG CGACCGCGCG
GCGCTTGCAG GCTCGAGCGG CGATCCGTGG AACGGCAGGA CACTCGAATG GGCGACCGCC
TCGCCGCCGG CGGCCTACAA TTTCGCCGTC GTGCCACAGG TGCATGGCAT TGATTCATGG
TGGACCATGA AGCAGACGCG AGCGGCGGAC CGCGGACCCG CCCGCTTTCA CGACATTATC
ATGCCCGACG ATAGCGGTGC CGGAATCGTG CTTGGTGCGA TGTCGTTCGT ATTCGCCTTT
GCAATGATCT GGCAAATCTG GTGGCTGGCC GCCGTTGGAG GGCTGGGCAT GTTTGCCGCG
GCGCTGTCGC AGACGTTCCA TGATCACGCC GAGCATCGCA TCCCGGCGAG CGAAGTCGAA
GCAATCGAGA GCCGCCGCGC TATATCCCCC GCACTCGCAC TTGAGGCGCC GACGTGA
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| Protein sequence | MFGKLTIDAL PFYSGIAMAG ALTVVCGVLG VVVLITWLGR WRYLWTEWLT SLDHKKIGIM
YVALALIMLV RGVIDALMIR TQQAFAFEPH GYLPPEHFDQ IFTSHATIMM FFVAMPFVLG
LFNIVVPQQI GARQMAFPFM NSASLWLTAS GAALVMISLV VGKFSTAYWT AYPPQSGVQL
SPGVGVDYWI WAILLSSVGA MLSGLNFLVT IVKRRAPGMR LMMMPLFTWT ALCTGILIIF
AYPALIVAAA LLGLDRHLGM HFFTGEGGNV TNYVSLFWIW GHPHVYILIL PAFGIYSEVV
ATFSGRRLSG YTPLVYSTVA ITALSFVVWL HHFFTMGSGA DVNAFFGSAA PLIAVPTVVT
IVGWLLTMYR GRVQFSVPML FTLGFVITFL VGGMTGFLFA VAPSDMHNTT FRVAHFHNLL
IPGALFGYFA GYQYWFPKAF GFRLEEKWGR RAFWCWIIGF CLAFMPLYVL GLMGMPQRLN
RNAVADWQPY LIVAQFGVLF IMCGIACLAI QIAVSIRDRA ALAGSSGDPW NGRTLEWATA
SPPAAYNFAV VPQVHGIDSW WTMKQTRAAD RGPARFHDII MPDDSGAGIV LGAMSFVFAF
AMIWQIWWLA AVGGLGMFAA ALSQTFHDHA EHRIPASEVE AIESRRAISP ALALEAPT
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