Gene Nham_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3424 
Symbol 
ID4031858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3771340 
End bp3772356 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID637971835 
Producthypothetical protein 
Protein accessionYP_578614 
Protein GI92118885 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0709328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCT CCAACGCTCC GCAGCAGAAC TCCATCGCCT CGGTCGGCGA ACGCGTTCGT 
CCCGTAGCCA TCGGTACGCC GGTTGCTGCC GTGTATTTCA TCGGCGATCG CGCCGCATTC
GTCGGGGACG AGGAGACGAT CACACTCGTT TCCAGCGATG GCGAGAAGGT TGTCGTGACC
GTTCATGGCG GCGCGATCCT GTCGTCGGTT TCGGACGGCA GGCGGATCGT CACCGGCGGC
GACGACGGCA AGGTTGTCGC GCTCGATATC AAGGGCGAGA GTTCGGTTCT TGTGACCGAC
GCAAAACGCC GCTGGATCGA CAACGTCGCG GTCCATCCCG ATGGCACGCT TGCATGGTCC
GCCGGCAAGA CCGCGTTCGT GCGCGGGCTC AAGGGTGAGG ACAAGTCGCT CGAAGCGCCC
TCGAGCGTCG GAGGACTTGC GTTTGCGCCG AAGGGCCTGC GGCTCGCGCT CGCGCACTAC
AACGGCGTGT CGCTGTGGTT TCCGAACATG ACGGCGAAGC CGGAGCGGCT GGAATGGGCC
GGTTCGCACC TTGGCGTTGC GTTCAGTCCT GACAGCAGGT TTCTCATCAC CACCATGCAC
GAGCCGGCGC TGCACGGCTG GCGGCTGGCG GATGCGCAGC ACATGCAGAT GACCGGCTAT
CCCAGCCGCG TCAAATCCAT GTCATGGGGC ATGGGTGGAA AATTTCTGGC CACGTCCGGC
GCGGACCGTG TGGTGGTGTG GCCGTTCGCC AGCAAAGACG GTCCGATGGA CAAGGAGCCG
GCTATGCTGG CGCAGTTGGA GGCGCGCGTC ACCGCGGTCG CCTGCCATCC GACGCAGGAC
TTCCTCGCCG CCGGTTACGA CAACGGCACC ATCCTGATGG TGCGGCTCAC CAACGGCGCC
AAGGTTGTCG TCCGCCGCGA CGGTGCTGCA CCTGTCGCCG CGCTGGCATG GAACGCGAAA
GGTTCGATGC TGGCTTTCGC CCTGCAGAAC GGCGATGCAG GGCTGGTGGA TCTCTAG
 
Protein sequence
MTVSNAPQQN SIASVGERVR PVAIGTPVAA VYFIGDRAAF VGDEETITLV SSDGEKVVVT 
VHGGAILSSV SDGRRIVTGG DDGKVVALDI KGESSVLVTD AKRRWIDNVA VHPDGTLAWS
AGKTAFVRGL KGEDKSLEAP SSVGGLAFAP KGLRLALAHY NGVSLWFPNM TAKPERLEWA
GSHLGVAFSP DSRFLITTMH EPALHGWRLA DAQHMQMTGY PSRVKSMSWG MGGKFLATSG
ADRVVVWPFA SKDGPMDKEP AMLAQLEARV TAVACHPTQD FLAAGYDNGT ILMVRLTNGA
KVVVRRDGAA PVAALAWNAK GSMLAFALQN GDAGLVDL