| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3417 |
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| Symbol | |
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| ID | 4033240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3762475 |
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| End bp | 3764565 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971828 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_578607 |
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| Protein GI | 92118878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA CGCCTCAATC GCCGCCATCC GCCTCCGACC TGGACAACCC GTTGCTGAAG
CCGTGGCAAA CGCCCTTCCA GACCCCGCCG TTCGGCGAGA TCGCGCCGGA ACACTTCCTG
CCGGCCTTCG AACAGGCGTT CACCGACCAT GCCGCCGAGG TCGCCGCCAT CACTCACGAT
CCCTCGGCGC CGGACTTCGC CAACACCATC ACCGCGCTGG AACGCTCCGG CAAGTTGCTC
GCGAAGGTGT CGGCGGTGTT CTACGACCTG GTGTCGGCGC ACTCCAATCC GGCGCTGCTC
GAGATCGACA AGGATGTCTC CTTGCGGATG GCGCGGCACT GGAACCCGAT CCTGATGAAC
GCGGTGCTGT TCGGCCGCAT CGCGCAGCTT CACGAGAATC GCGTCACGCT CGGACTGACG
TCCGAACAGT TGCGCCTGCT GGAACGCACC TACACCCGCT TCCACCGGGC CGGCGCTGGG
CTCGACGATA CCGCGAAGAC GAGGATGGCC GAGATCAACG AGCGGCTGGC CCATCTCGGC
ACCAGCTTCA GCCACCATCT GCTCGGCGAC GAGCAGGAAT GGTTCCTGGA ACTCGGCGAG
GGCGATCTTG ACGGACTTCC GGGTAGCTTC GTCGCGGCCG CGCGCGCCGC GGCCGAGGAG
CGCGGGCTGC CCGGCAAGGC GATCGTAACC ACCTCGCGCT CCTCGATGGA GCCGTTCCTC
AAGAGCTCAC ACCGTCGCGA TCTGCGCGAG AAGGTCTACA AGGCCTTCAC CGCGCGCGGC
GACAACGGCA ACGCCAACGA CAACAACGCG ACCATCGTGG AGATCCTCGC GCTGCGCGAG
GAAAGCGCAA AACTCCTGGG CTACCCGACC TTCGCCGTCT ACCGGCTTGA GGACTCCATG
GCCAGGACGC CGCAAGCCGC CCGCGACCTG CTGGAGCGGG TCTGGAAGCC GGCCCGTGCG
CGGGCGCTCG CCGACCGCGA TGCCTTGCAG GCCCTGATCG CCGAGGAGGG CGGCAACTTC
ACCCTCGCGC CGTGGGACTG GCGTTACTAC GCCGAAAAGC TGCGGCATGT CCGCGCCGAT
TTCGACGACG CCGCGATCAA GCCATATCTG ACGCTGGAGG GCATGATTGC CGCTGCCTTC
GACTGCGCGC ATCGGCTGTT CGGGCTCACC TTCTCCGAGC GCAAGGACAT CCCGGTCTGG
CATCCGGACG TTCGGGTGTG GGAGGTGAAG GATGCCTCGG GCAAGCATCG GGCGCTGTTC
TACGGGGATT ACTTCGCTCG CGCCTCGAAG CGGTCCGGCG CGTGGATGAC ATCGCTGCGC
GACCAGCAGA AGCTCGACGG CGAGGTCGCG CCGCAGGTCG TGAACGTCTG CAACTTCGCC
AAGGGCGCGG AGGGCCAGCC CGCGCTGCTG TCGCCGGACG ATGCGCGCAC CCTGTTTCAT
GAGTTTGGTC ATGGTTTGCA CGGCATGGCG TCCAACGTGA CCTATCCGTC GCTGTCGGGC
ACCAGCGTGT TTACCGATTT CGTCGAACTG CCTTCGCAAC TCTACGAGCA CTGGCAGGAA
CAGCCGCAGG TTCTGCGGCA ATTCGCAAAG CACTACCAGA CCGGCGAGCC GCTGCCGGAC
GATCTGCTCA CGCGCTTCCT CGCGGCGCGG CAATTCAACC AGGGCTTCGC CACCGTCGAA
TTCGTCGCCT CGGCGCTGAT CGACCTGGAG TTCCACAGCC AGCCGGCCTC AGAGGTTCGC
GATGTCAGGG CTTTCGAGCG TACTGAACTG GAGAAGATCG GCATGCCCGC CGAGATTTCG
CTGCGGCACC GGCCGACCCA GTTCGGCCAC ATCTTCTCCG GCGACCATTA TGCCGCCGGC
TACTACAGCT ACATGTGGTC GGAAGTGATG GACGCCGATG CCTTCGGCGC CTTCGAGGAG
AGCGGCGACA TCTTCGACCC GGCCACCGCG AAGCGGCTGC ACGATGACAT CTATTCGTCC
GGCGGTTCGC GCGATCCGGA AGAAGCCTAC GTCGCGTTCC GCGGCCGCAA GCCGGAACCG
GAGGCGCTGT TGCGCCGTCG CGGGCTCGTC GAAGAGCCGC AGGCGGCGTA G
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| Protein sequence | MSDTPQSPPS ASDLDNPLLK PWQTPFQTPP FGEIAPEHFL PAFEQAFTDH AAEVAAITHD
PSAPDFANTI TALERSGKLL AKVSAVFYDL VSAHSNPALL EIDKDVSLRM ARHWNPILMN
AVLFGRIAQL HENRVTLGLT SEQLRLLERT YTRFHRAGAG LDDTAKTRMA EINERLAHLG
TSFSHHLLGD EQEWFLELGE GDLDGLPGSF VAAARAAAEE RGLPGKAIVT TSRSSMEPFL
KSSHRRDLRE KVYKAFTARG DNGNANDNNA TIVEILALRE ESAKLLGYPT FAVYRLEDSM
ARTPQAARDL LERVWKPARA RALADRDALQ ALIAEEGGNF TLAPWDWRYY AEKLRHVRAD
FDDAAIKPYL TLEGMIAAAF DCAHRLFGLT FSERKDIPVW HPDVRVWEVK DASGKHRALF
YGDYFARASK RSGAWMTSLR DQQKLDGEVA PQVVNVCNFA KGAEGQPALL SPDDARTLFH
EFGHGLHGMA SNVTYPSLSG TSVFTDFVEL PSQLYEHWQE QPQVLRQFAK HYQTGEPLPD
DLLTRFLAAR QFNQGFATVE FVASALIDLE FHSQPASEVR DVRAFERTEL EKIGMPAEIS
LRHRPTQFGH IFSGDHYAAG YYSYMWSEVM DADAFGAFEE SGDIFDPATA KRLHDDIYSS
GGSRDPEEAY VAFRGRKPEP EALLRRRGLV EEPQAA
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