| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3401 |
|---|
| Symbol | |
|---|
| ID | 4033224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3744025 |
|---|
| End bp | 3744891 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637971812 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_578591 |
|---|
| Protein GI | 92118862 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCC TGAAGGCGAC GCTGCTGGCG CTGATGCTGT GTTGGGTCGG CGCGGCATTC
GCGGATGTCG CGGTGCCGCC TTTGACCGGG CACGTGGTCG ATCAGACCGC GACGCTGAGC
AGCGATCAGA AGGCGTCGCT CGAACAGAAG CTGAAAGCGT TCGAGGATCG CAAGGGCAGC
CAGGTCGCGG TGCTGATCGT GCCGACAACC GAGCCGGAAA CCATCGAGCA GTATTCGATC
CGGGTTGCCG AGCAATGGAA GATCGGCCGT AAGAAGGTCG ATGACGGCGC GATCCTTCTC
GTCGCCAAGG ACGACCGCAA GCTGCGGATC GAGGTGGGTT ACGGCCTCGA GGGCGCGCTG
ACTGATCTCA CCTCGAAACG GATCATCGAC GAAGAGATCG TGCCGAAGTT CCGAACCGGC
GATTTTGCCG GCGGCATCTC CGCCGGTGTG GATCGCATGT TACGCGTGAT CGACGGCGAG
CCCTTGCCTG CGCCGAAACC GCAGGCGCAG TACGCGAACA ATTTCAGCAT CGAGGATCTC
TTCAATCCGT TTGTCATCGT CGGCGTGCTT GTCCTCGGCG GGATATTCCG GGGTGTGTTC
GGCCGGCTGT TCGGCTCTGT GGCGGTCGGG GGGATCGTCG GTTTGGTGGC CTGGCTGTTC
ATCGGATCGC TTGTCGTCTC GGGTGCCGCC GGAGTGCTTG CCTTCGTCTT CACGCTGCTC
GGCGATGCGA TTGTCTCGGG CGCGGGCCGG GGCGGCGGCG CCTGGATCGG CGGCGGCCGC
GGAGGCGGAT CGTTCTCGGG CGGCGGCGGA GGATTTAGCG GTGGCGGCGG AAGCTTTGGC
GGCGGCGGCG CATCGGGGAG CTGGTAG
|
|---|
| Protein sequence | MRTLKATLLA LMLCWVGAAF ADVAVPPLTG HVVDQTATLS SDQKASLEQK LKAFEDRKGS
QVAVLIVPTT EPETIEQYSI RVAEQWKIGR KKVDDGAILL VAKDDRKLRI EVGYGLEGAL
TDLTSKRIID EEIVPKFRTG DFAGGISAGV DRMLRVIDGE PLPAPKPQAQ YANNFSIEDL
FNPFVIVGVL VLGGIFRGVF GRLFGSVAVG GIVGLVAWLF IGSLVVSGAA GVLAFVFTLL
GDAIVSGAGR GGGAWIGGGR GGGSFSGGGG GFSGGGGSFG GGGASGSW
|
|---|
| |