Gene Nham_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3400 
Symbol 
ID4030859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3743525 
End bp3744022 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID637971811 
Producthypothetical protein 
Protein accessionYP_578590 
Protein GI92118861 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.358552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA GGCGTATCGG CAAGCATCTG CTTGGGCATC GCTGGCGGGT GCGAAAGCAT 
TTGCCGCCAG AGGCGATGGC CGCCATCGAA CGGGCGATCC GCGCCGGCGA GACGACCCAT 
TCGGGGCAGG TGGTGTTTGC CGTGGAAGGC GCGCTCGACG GCATTCCCCT GTTTCGCAAT 
CAGCCGGCGC GCGAGCGGGC GCTCGACGTG TTCGCGCACC TGAAAATCTG GGATACTGCG 
CACAACAACG GCATCCTGAT CTATTTGTTG CTCGCTGACC GCGATGTCGA GATCGTTGCC 
GATCGCGGCA TTCACGCCAG GGTCGGCGAG GCGGTATGGA AGACCATCTG TGTCGCGATG 
GAGGCTGAGT TCAAGCGAGG CCGCTTCGAG GCCGGAGTCG TCGAGGGCAT CGCAGCCGTC 
TCGCGGCAAC TTGCAAAACA TTTCCCGAAG CAGGGGGCCG GTCCGAACGA ACTGCCGGAT 
GCGCCGGTGG TGATTTAG
 
Protein sequence
MDIRRIGKHL LGHRWRVRKH LPPEAMAAIE RAIRAGETTH SGQVVFAVEG ALDGIPLFRN 
QPARERALDV FAHLKIWDTA HNNGILIYLL LADRDVEIVA DRGIHARVGE AVWKTICVAM 
EAEFKRGRFE AGVVEGIAAV SRQLAKHFPK QGAGPNELPD APVVI