Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3398 |
Symbol | |
ID | 4030857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3738865 |
End bp | 3741918 |
Gene Length | 3054 bp |
Protein Length | 1017 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971809 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_578588 |
Protein GI | 92118859 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.801509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTC TCAAACGGCA GTTTGCGGAA GGCCGAGAAT CGCCGATGTC GTCCCAGATT CCACCGCCGT TTTCGGCTTC CTACGCTCCG GACGACCGGG CCATGGCGGC GCTCCTGCTC GCCGAGACGC GGCCGGTGCC CGAACGGGAA GCGCGGATCG ATCGCACGGC GCGCGGCCTG ATCGACGCCA TCCGACGCAA CGACGATCCA CTGGGCGGCG TCGAGGACAT GCTGCGCGAG TTTGCATTGT CGACCAGGGA AGGACTCGCG CTGATGGTGC TCGCCGAAGC GCTGCTGCGG GTGCCCGATG CCGATACCGC GGACCGGTTC ATCGAAGACA AGCTCGGGCA AGGCGACTTC ATCCATCACG AGACCAGATC CAGCGCCTTC CTCGTCAACG CCTCCGCCTG GGCGCTCGGG TTGTCGGCGC GGGTCGTCCA GCCGGGCGAG ACGCCGCAGG GAACCATCGG GCGGCTCACC AAGCGGCTCG GCGTTCCGGC GGTGCGGGCG GCGACGCGGC AGGCGATGCG GCTGATGGGC GGCCACTTCG TGCTCGGCGA GACCATCGAG GCGGCGCTCG AGCGGGCGCA CGCGCACGCG GCGGGACACG CCCGCTATTC CTTCGACATG CTCGGCGAGG GCGCGCGTAC CGCCGCGGAT GCGGATCGTT ATTTCAAGTC CTACGCCGCC GCGATCGAGG CGATTGGCCA ATACGCCGGC GACAGGCCCC TGCCCGACCG CCCCGGCATT TCCGTCAAGC TGTCGGCGCT GCATCCACGC TTTGAGGCGG TGAGCCGACA ACGGGTGATG GCGGAACTGG TGCCGCGCGT CATCGATCTT GCCGCGCGCG CCAAGGCGCA CGATCTCAAC TTCACGGTCG ATGCGGAGGA AGCCGATCGG CTGGAACTGT CGCTCGACGT CATCGCCGCC GTCGCCGCCA ATCCCTCGCT CGCCGGCTGG AGCGGCTTTG GCCTCGCCAT TCAGGCCTAT CAGAAGCGCG CCTCTGCGGT GATCGATTAC ATCGACGACC TCGCGCGACA CCTCAATCGG CGGATGATGG TCCGTCTGGT GAAGGGCGCG TACTGGGACA CCGAGATCAA GCGCGCGCAG GAACGCGGGC TCGACGGCTA TCCCGTATTC ACCCGCAAGG CGATGACCGA CCTGAACTAC ATCGCCTGCG CAAAAAAACT GCTGACACTG CGGCCACACC TCTTTCCGCA ATTCGCGACC CACAATGCCC TCACCGTCGC CACGCTTCTC GAACTGACTG ACGGAGCCGA CGACGGATAC GAATTCCAGC GCCTGCACGG CATGGGCGAC GCCCTCTACG CCAAGCTCGG CAAGGATCGT CCGGCCATCG CCTGCCGCAC CTATGCGCCC GTCGGCAGTC ATCGCGACCT GCTCGCCTAT CTGGTGCGCC GCCTGCTCGA AAACGGCGCC AACTCCTCCT TCGTCGCAAT GGCCTCCGAT CCGCGAGTCC CGGCGGACAC TCTGCTGCGC CGACCGGCCG ATATCATCGG CAATGCCGAC AATGCCGGGC ATACGACGAT TCCGCTGCCG CGCGATCTAT TTCAGCCGGA GCGCGTCAAT TCGCGTGGCA TCGAATTCGG CGAGCGCGCG GCGCTGAACC GGCTGGTTGC CGACGTCGCT ACCAAACAAA CCTTGACCCT CACGGTGAAA CACAGCGCGC CGGAGGACGT GGACCGCATT GTCTCTCTGG CGCGCGACGG ATTTCCGTCA TGGAGCCGCA CACCGGCGGC TATGCGAGCG GCTGCCCTGG AGCGCGCAGC CGACTTGCTG GAACAACGGT CGGCGCATTT CATCGCGCTG CTGCAGCGGG AAGGCGGCAA GACGCTGGAT GATTCCGTGT CGGAGGTCCG CGAAGCCGCC GACTTCTGCC GCTACTACGC CGCGCAAGGC CGCAAGCTGT TCGACAACGC GCAGCCGATG CCGGGGCCGA CCGGCGAGCG CAACACGTTG CGGCTGCGCG GGCGCGGCGT CTTTGCCGCG ATCTCGCCGT GGAATTTTCC GCTGGCGATC TTTACCGGAC AGATAACCGC GGCGCTGATG GCCGGCAATA CGGTGGCCGC GAAACCCGCC GAGCAGACGC CGCAGATCGC GGCCGAGGCC GTGCGCCTGC TGCATGAGGC CGGCATCCCG GAAACGGCGC TTCACCTGAT CCAGGGCGAT GGCCCCATCG GGGCTGCGCT TGTCGCGCAT CGCGATATCG CCGGCGTGGT CTTCACCGGA TCGACGGTAG TGGCGCGGTC GATCAACCGC TCGCTCGCCG CCAAGGACGG CCCCATCGTG CCGCTGATCG CCGAGACCGG CGGCATCAAC GCCATGATCG CCGACGCCAC CGCGCTGCCC GAGCAGGTCG CCGACGATGT CGTGACTTCG GCGTTCCGCT CCGCCGGGCA ACGCTGCTCG GCGCTGCGGC TGCTGTTCGT GCAGGATGAC GTGGCCGACC GCATGATCGA GATGATCGCG GGCGCCGCGC GCGAACTGAG GATCGGCGAC CCGTCCGATC CCGCCACGCA TGTCGGCCCG GTGATCGACC GCGAGGCCAA ACAGCAACTC GATGCGCATA TCGCGCGCAT GACGCGCGAA GGTCGCGTGC GTTTCGCAGG ACAAGCGCCC GCGTCCGGCA ATTTCGTCGC GCCGCATATC TTCGAACTGG CCGACGCGCG GCAACTGAGC GAAGAGGTGT TCGGACCGAT CCTCCACGTC GTGCGTTATC GCGCCTCCGG CCTCGATGCG GTTCTGCAAG CCATCGACGA CAGCGGCTAC GGCCTGACGC TCGGCATCCA CTCCCGCATC GACGACACGA TCGAGGTGAT CGTCGATCGC CTCCAGGTCG GAAACGTCTA CGTCAACCGC AACATGATCG GCGCGGTGGT CGGCGTGCAG CCCTTCGGCG GTCACGGCCT GTCGGGGACC GGGCCCAAAG CCGGCGGCCC GAACTATCTC ACCCGTTTCG CGACCGAGCA GACCGTGACG GTGAACACCG CAGCCGCCGG CGGTAATGCC GCATTGATGA CCGAAGAAGG GTAG
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Protein sequence | MTVLKRQFAE GRESPMSSQI PPPFSASYAP DDRAMAALLL AETRPVPERE ARIDRTARGL IDAIRRNDDP LGGVEDMLRE FALSTREGLA LMVLAEALLR VPDADTADRF IEDKLGQGDF IHHETRSSAF LVNASAWALG LSARVVQPGE TPQGTIGRLT KRLGVPAVRA ATRQAMRLMG GHFVLGETIE AALERAHAHA AGHARYSFDM LGEGARTAAD ADRYFKSYAA AIEAIGQYAG DRPLPDRPGI SVKLSALHPR FEAVSRQRVM AELVPRVIDL AARAKAHDLN FTVDAEEADR LELSLDVIAA VAANPSLAGW SGFGLAIQAY QKRASAVIDY IDDLARHLNR RMMVRLVKGA YWDTEIKRAQ ERGLDGYPVF TRKAMTDLNY IACAKKLLTL RPHLFPQFAT HNALTVATLL ELTDGADDGY EFQRLHGMGD ALYAKLGKDR PAIACRTYAP VGSHRDLLAY LVRRLLENGA NSSFVAMASD PRVPADTLLR RPADIIGNAD NAGHTTIPLP RDLFQPERVN SRGIEFGERA ALNRLVADVA TKQTLTLTVK HSAPEDVDRI VSLARDGFPS WSRTPAAMRA AALERAADLL EQRSAHFIAL LQREGGKTLD DSVSEVREAA DFCRYYAAQG RKLFDNAQPM PGPTGERNTL RLRGRGVFAA ISPWNFPLAI FTGQITAALM AGNTVAAKPA EQTPQIAAEA VRLLHEAGIP ETALHLIQGD GPIGAALVAH RDIAGVVFTG STVVARSINR SLAAKDGPIV PLIAETGGIN AMIADATALP EQVADDVVTS AFRSAGQRCS ALRLLFVQDD VADRMIEMIA GAARELRIGD PSDPATHVGP VIDREAKQQL DAHIARMTRE GRVRFAGQAP ASGNFVAPHI FELADARQLS EEVFGPILHV VRYRASGLDA VLQAIDDSGY GLTLGIHSRI DDTIEVIVDR LQVGNVYVNR NMIGAVVGVQ PFGGHGLSGT GPKAGGPNYL TRFATEQTVT VNTAAAGGNA ALMTEEG
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