| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3388 |
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| Symbol | |
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| ID | 4030847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3728345 |
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| End bp | 3729019 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971799 |
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| Product | Hly-III related proteins |
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| Protein accession | YP_578578 |
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| Protein GI | 92118849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0217913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGTTGC AAACCGACCC CGCGAATGCC ATGGCCGGCG CGATCCGCTG GAATTACGAC
CGCGCCGAAC TGATCGCCGA CGGCGTCGTG CATGTGCTTG GCGTCCTCGC CGGATTGATC
GCGGCCACGG TGCTGATCGT GCTCACCGCG GTTTATGCCG GCCGCGACGT GGCGGTCGTG
TCCATCTACG TCGCCGGCCT GATGACCATG CTGGTATTGT CCGCGACCTA CAACCTCTGG
CCGGTGTCGC CGCGGAAATG GCTGCTGCGC CGCTTCGATC ATTCCGCGAT CTACGTTCTG
ATCGCGGCGA CCTACACGCC GTTCATCATG CAGGTGAAGG ACAACGCATT TGCGCTCGCT
CTACTGATCG GAGTCTGGTG CGTAGCGATG ATCGGAGTGG CGCTCAAACT GGTTCTGCCG
GGCCGGTTCG ACCGGCTGTC GGTCGTTCTC TATCTGGTGA TGGGGTGGAG CGGCATCACG
ATCTACGACG ACGTGGTGCC GTCGCTGTCC GCGACAGCCC TGTGGTTTGT GGTCGTGGGC
GGGGCACTCT ACAGCTTCGG TGTGATCTTC CACACCTGGC GGCGGCTCCG CTTCCAGAAC
GCCATCTGGC ATTCGTTCGT CCTGCTCGGT GCAGCCTGTC ATTATACGGC CGTGTTCGAT
CTCGTCTTGG CCTGA
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| Protein sequence | MTLQTDPANA MAGAIRWNYD RAELIADGVV HVLGVLAGLI AATVLIVLTA VYAGRDVAVV
SIYVAGLMTM LVLSATYNLW PVSPRKWLLR RFDHSAIYVL IAATYTPFIM QVKDNAFALA
LLIGVWCVAM IGVALKLVLP GRFDRLSVVL YLVMGWSGIT IYDDVVPSLS ATALWFVVVG
GALYSFGVIF HTWRRLRFQN AIWHSFVLLG AACHYTAVFD LVLA
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